Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0217 ATGCTTTTTAGATCTTTATTTTTTACATTCATTTTCAAAGCTTCCATTTTTTTTCGCCGGATTTCGTTTTCCCTCTTCCACTCTCTCTGTTTCTCATCTCCTCATTCTTCCGCCATGGCTTTGCTGCTTCAGCTATGGCTTCTTCATCTCTTCTTCTTTCTCTTCCTTTCTCTTTCCACTGTTTGTTATTGCCAACTCACTCCCCCTCAAAATATCGAAACTTTCTACCCTCCTCCAATTATTTCTCCACCACCGTCGTCCCCACTTGACCACCCGCCGTCATCGTCGTCGCCGTCGACGTCGACCAGAACCATCGTGACGGCGGTGGCCGTCACTGCAGTGGGTATGGCTCTGATTTCCTCGTTGTTCTTCTTCTTGATCCAGAAATATCTGATCAGAAGAAAGCGAAAAACAGAGGAGGTGAATTCGGGTCTGGGTCAAGGTCCGGCCACGCAGCCGGCGGTTGCTCAGAGTGACTTTTCGCGTCTTGATGGGAATCTTAAAGGGTTCATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGCGACTTGAAAGAAGGAAATCCAAGAATAGCTTTGATCGGGGTGATGGAGAAGGAAATGTTAAGGGAAATCGAAGCAAAAAGTCAGAGCCTGTTCAAGAAATTCCTCTGCTTCGAGGAAAATCTTCAACTTCACATGTTAAAATTGCACCGGAAGATGAAGAACCCAGTCGGATTACTTCTCCTCCGCCCCCTCCGCCGCCACCCAAGATTAACCACCCTCCGCCATTTACTGGGAATTCTGTTCAGGCAGTTGGAAAACCATCGAGTAGTTCAATTCTTTCATCAACAGCACCATCGCAACCGGCGCCAATTCAGGTACCTCCGTCACAATCTCTCATGGCCGTTCCTAACAATAAGAGCTCTGTTCCGCCACCGCCGCCGCCAATTCCAGTCAAGACTAATTCAAGACCGCCACCGCCGCCACCTCCCATTCCGGCAAAGACCAATTCAAGACCGCCGCCGCCGCCTCCAATACCAGCCAAGACCAATTCCGCAGCCCCACCTCCCCCTCCAATTCCGGGCAAGGAAAATCCGGCAGCACCACCGCCGCCGCCGCCCAAGGCCGGCACTTCCAAATTGCCGTTAAGGCCTGCACCTCCAAAAGGGGATAAATCCTCTGGAGAGGCTTCTTCATCAGCCGATAATGGTCAGGTCAAAATGAAGCCTCTGCATTGGGATAAAGTGAACACCGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGAACGGCTCGTTCAAATTTGATGGGGATCTAATGGAAGCTCTGTTTGGTTATGTCGCAACCAACCGGAAATCCCCCCGGAGTGAAGCTAACTCTTCAGCAAACGCCGTCGGCCGGAACTCAGGGCCGTCGCAGGTTTTCATTCTTGAACCCAAAAAGTCTCAGAACATAGCCATTGTAGTCAAGTCCTTGACTATTCCTCGAAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGCCTCGAAACAGAGATTCTTGAAAAGCTCACAAGAATTGCTCTGACCCAAGAAGAAATTTCTCAAATTCTTGCGTACAAAGGAGACCCCCAGAAGCTTGCCGATGCTGAATCTTTCCTTTACCATCTTCTCAATTCGGTTCCATCTGCTTTTACGCGCTTCAATGCGATGCTTTTCCGATTGAATTTCAGCTCAGAGATTCTCCATCTCAAGGAGTGTTTACAAACTCTGGAATCGGCCTGCAAGGAGCTTAGAACTCGAGGGCTGTTTTTGAAACTGCTTGAAGCAATTCTCAAAGCTGGGAATCGGCTGAATGCGGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTCACATCTCTGCGGAAGCTCTCTGATGTTAGAAGCACTGACGGGAAAACCACTTTGCTCCACTTTGTGGTGCAAGAAGTCATCAGGGCGGAAGGGAAAAGGTGTGTTTTAAACAGGAACAAGAGCATGAGCCGTAACAGCAGCCTTAGCAGCGACAACAGCTTTAGTAGCTCCGAAAATTCGACTTCAAAAGATGACAGAGTACAGGAATATATGATGTTGGGACTGCCAGTGGTGGGAGGCCTGAGCGCTGAGTTCTCTAATGTAAAGAAAGCAGCATCGATCGACTACGAAAGCTTCGCCAACACCGGATCGTCACTGACCAGCCGTACCACAGAAATCCGGCAGCTTTTGACTCAAATTGGGAACAATGGAGGTGGGTTTGCGAAAGAAATGAGAGGTTTTCTTGAAGCAGCAGAGGATGAGCTGAAGGTGGTGAGAGAAGAACAGACGAAGGTGATGGAGCTATTGAAGAAGACAACAGAGTATTATCAGGCTGGAAGTTCAAAAGATAAAGAAGCAAATAGGCTTCAAATATTCATCATAGTTAAAGATTTTCTAGAAATGGTAGATCGGGTGTGTGTTGAAATAGCTCGAAATCTCCAGAGGAGGAGATCGTCGGCAGTAAATTTGGGTTCGTCACCGGTTAGATCGAAGGCCATCTTCCCTAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATTCAGATGAAGAGTTCTGA 2598 47.96 MLFRSLFFTFIFKASIFFRRISFSLFHSLCFSSPHSSAMALLLQLWLLHLFFFLFLSLSTVCYCQLTPPQNIETFYPPPIISPPPSSPLDHPPSSSSPSTSTRTIVTAVAVTAVGMALISSLFFFLIQKYLIRRKRKTEEVNSGLGQGPATQPAVAQSDFSRLDGNLKGFIVDENGLDVIYWKRLERRKSKNSFDRGDGEGNVKGNRSKKSEPVQEIPLLRGKSSTSHVKIAPEDEEPSRITSPPPPPPPPKINHPPPFTGNSVQAVGKPSSSSILSSTAPSQPAPIQVPPSQSLMAVPNNKSSVPPPPPPIPVKTNSRPPPPPPPIPAKTNSRPPPPPPIPAKTNSAAPPPPPIPGKENPAAPPPPPPKAGTSKLPLRPAPPKGDKSSGEASSSADNGQVKMKPLHWDKVNTANADHSMVWDKMNGSFKFDGDLMEALFGYVATNRKSPRSEANSSANAVGRNSGPSQVFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQKLADAESFLYHLLNSVPSAFTRFNAMLFRLNFSSEILHLKECLQTLESACKELRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTSLRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSMSRNSSLSSDNSFSSSENSTSKDDRVQEYMMLGLPVVGGLSAEFSNVKKAASIDYESFANTGSSLTSRTTEIRQLLTQIGNNGGGFAKEMRGFLEAAEDELKVVREEQTKVMELLKKTTEYYQAGSSKDKEANRLQIFIIVKDFLEMVDRVCVEIARNLQRRRSSAVNLGSSPVRSKAIFPNLPENFMSDKSRGSSSDSDEEF 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1912084 1915087 + Maker00025797 Lcy7g0217 637049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0217 865 Coils Coil 749 776 - -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 663 682 - -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 448 466 - -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 239 257 - -
Lcy7g0217 865 ProSiteProfiles Formin homology-2 (FH2) domain profile. 393 836 IPR015425 -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 191 216 - -
Lcy7g0217 865 Pfam Formin Homology 2 Domain 396 810 IPR015425 -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 302 376 - -
Lcy7g0217 865 SUPERFAMILY Formin homology 2 domain (FH2 domain) 335 824 - -
Lcy7g0217 865 SMART it6_source 393 825 IPR015425 -
Lcy7g0217 865 Gene3D Formin, FH2 domain 400 830 IPR042201 -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 191 405 - -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 447 466 - -
Lcy7g0217 865 PANTHER FORMIN-RELATED 51 862 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lcy7g0217 865 MobiDBLite consensus disorder prediction 663 686 - -
Lcy7g0217 865 MobiDBLite consensus disorder prediction 258 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2307 Lcy-Chr13:41958308 Lcy7g0217 Lcy-Chr7:1912084 2.35E-129 dispersed
Lcy7g0217 Lcy-Chr7:1912084 Lcy9g1230 Lcy-Chr9:36767636 8.88E-82 dispersed
Lcy7g0217 Lcy-Chr7:1912084 Lcy8g0729 Lcy-Chr8:26920107 1.37E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0217 K28090 - csv:101208197 1096.65