Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0228 | ATGAGTGGATGGGATAGGGTTAGACCATCAACTTCGAGATTTGGCCGCGGCAATTCTGCAATGCCCGAGAGGACCTCCTCCACTACTACTACGGTTCGACTCGGCCGAGTCCAGCCGCAGGCCCCCGGACATCGCACCATCTTCTGCAATGATCGCGACGCTAATCTCCTTGTCAAATTCAAGGGGAATTCAGTTTCGACGACTAAGTATAACTTCTTCACCTTCTTTCCGAAAGGGTTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACAATCTCAATCTTATCCACCACACCCATCAGTCCTGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCTACTCGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTGCAAGATCAAAAGTGGGAGAGCGTACCTTGGAAAAGGTTGCAGGTTGGAGACATTGTTAGGGTTCGGCAGGATGGGTTTTTTCCTGCGGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGACGGGGAGACAAATTTAAAGATTAGAAAGGCCCTGGAAAAAACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACCGGCAATGTTATTATTCAAAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGGTGCAGTCTCAGGAACACGGAGTATATTGTTGGGGCTGTTATTTTTACAGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAGAAAAAACTTGACAAACTTATACTTACACTTTTTGCTACTCTCTTTATCATGTGTTTGATTGGAGCCATTGGCAGTGGAGTTTTTGTAAACGAAAAGTACTACTACTTAGCTCTTGATAAGGGAGGGGAAAACCAATTTAACCCGCGCAACCGATTCCTGGTTGTCATTCTGACCATGTTTACCCTGATTACTCTGTATTCGACAATCATTCCTATTTCTCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCGACACAATATATCAATAAGGATCTAAATATGTTCCATGCTGAAAGCAATACCCCAGCGTTGGCTAGAACTTCCAATTTGAACGAAGAACTGGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCCATTGGTGGAGAGATTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGACGAGGAGCACAAATCAACCAATGCTGTACAAGAAAAGGGATTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCATGGAGAAATGAGCCCAACTCTGATCTTTGTAAGGAATTTTTTAGATGCCTTGCTATTTGCCATACCGTACTCCCTGAGGGCGATGAATCCCCAGAAAAGATCACATATCAAGCAGCATCACCTGATGAGGCTGCCTTGGTAACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACACCTACTACAATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATCCTAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTCGTGTGTCGTTATTCCGATGGTAGACTTGTCTTGTACTGCAAGGGCGCTGATACCGTAATATATGAGAGATTGGCTGGTGGAAATGACGATCTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCTGGTTTGAGAACCCTATGCCTTGCTTATAGAGATTTGCATCCTGACGTTTATGAAAGCTGGAATGAGAAATTCATTCAAGCTAAGTCTTCATTGAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGATCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTGACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTAATAAACAATGATATGAAACAATTTATTATCAGTTCAGAAACAGATGCAATCAGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAAAGGAATTGAAGAAATGTCTTGAGGAAGCGCAGCAGTGTTTACAATCTGTGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTACGAGTTACTTTACTAAATTTGAGCTTGAATTGTAGTTCAGTTGTTTGCTGCCGGGTTTCTCCATTGCAGAAAGCGCAGGTGACAAGTTTGGTAAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCCCAGTTTCGCTTTCTCACAGATTTACTTCTTGTGCATGGGCGATGGTCATATCTTAGAATATGCAAGGTTGTCACATACTTCTTTTACAAGAATCTTACGTTCACTTTAACGCAGTTTTGGTTCACCTTTCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCATTATATAATGTCATATTTACCGCCCTACCTGTAATAATTGTCGGACTATTTGACAAGGATGTCAGTGCTTTCCTATCCAAAAAGTACCCTGAGCTCTATAGAGAGGGAATAAGAAATGTGTTTTTCAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTCTATTATTTTGTAACCGTTTCCAGTTCCAGCAGTCAATCGTCATCTGGCAAGGTCTTTGGCCTGTGGGATATTAGCACGATGACTTTCACGTGCATTGTGGTGACTGTGAATTTGCGGCTGCTTATGATCTGCAATTCAATTACCAGGTGGCATTATATTACAGTTGGGGGAAGCATTTTAGCATGGTTCCTATTTATTTTCTTATATTCTGGTATTATGACACCGCATGATAGGCAGGAAAATGTATATTTCGTCATTTATGTCTTAATGAGTACATTATACTTTTACGTAGCTGTCCTCCTTGTACCCGTTGTTGCACTTCTTTGTGATTTCGCTTACCAAGGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTTCAAGAAATTCATAGACATGAACCTGAAGGTAGAAGAACGTCAGGATTTCTGGAGATTCAGAACCATCTTACACCGGAAGAGGCAAGAAGCTATGCCATGTCTCAACTCCCACGAGAGTTATCAAAGCACACTGGCTTTGCTTTCGACTCACCGGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAGGCATGGGATGTTGCCAGGAGAGCCAGTGTGAAGTCGAGACCTAAGATTAGGGAAAAGAAATGA | 3684 | 40.93 | MSGWDRVRPSTSRFGRGNSAMPERTSSTTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFIMCLIGAIGSGVFVNEKYYYLALDKGGENQFNPRNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHAESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGIAEQNGLKVDEEHKSTNAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKILDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVIYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNDMKQFIISSETDAIREVENRGDQVELARFIREEVKKELKKCLEEAQQCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSAFLSKKYPELYREGIRNVFFKWRVVTTWAFFSIYQSLVFYYFVTVSSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVLLVPVVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRRTSGFLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIREKK | 1227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1985149 | 2001324 | - | Maker00025885 | Lcy7g0228 | 637060 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0228 | 1227 | SFLD | C1.7: P-type atpase like | 405 | 906 | - | - | |
Lcy7g0228 | 1227 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 31 | 1146 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER) | |
Lcy7g0228 | 1227 | FunFam | Phospholipid-transporting ATPase | 688 | 895 | - | - | |
Lcy7g0228 | 1227 | Pfam | Phospholipid-translocating ATPase N-terminal | 47 | 111 | IPR032631 | - | |
Lcy7g0228 | 1227 | FunFam | Phospholipid-transporting ATPase | 532 | 687 | - | - | |
Lcy7g0228 | 1227 | SUPERFAMILY | HAD-like | 411 | 898 | IPR036412 | - | |
Lcy7g0228 | 1227 | SUPERFAMILY | Calcium ATPase, transduction domain A | 142 | 286 | IPR008250 | - | |
Lcy7g0228 | 1227 | SFLD | p-type atpase | 405 | 906 | IPR044492 | - | |
Lcy7g0228 | 1227 | PRINTS | P-type cation-transporting ATPase superfamily signature | 855 | 874 | - | - | |
Lcy7g0228 | 1227 | PRINTS | P-type cation-transporting ATPase superfamily signature | 423 | 437 | - | - | |
Lcy7g0228 | 1227 | FunFam | Phospholipid-transporting ATPase | 121 | 290 | - | - | |
Lcy7g0228 | 1227 | CDD | P-type_ATPase_APLT_Dnf-like | 62 | 1015 | - | - | |
Lcy7g0228 | 1227 | NCBIfam | HAD-IC family P-type ATPase | 828 | 934 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy7g0228 | 1227 | Gene3D | - | 689 | 895 | IPR023214 | - | |
Lcy7g0228 | 1227 | MobiDBLite | consensus disorder prediction | 12 | 31 | - | - | |
Lcy7g0228 | 1227 | Pfam | E1-E2 ATPase | 144 | 323 | - | - | |
Lcy7g0228 | 1227 | Gene3D | - | 125 | 290 | - | - | |
Lcy7g0228 | 1227 | Coils | Coil | 770 | 790 | - | - | |
Lcy7g0228 | 1227 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Lcy7g0228 | 1227 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 55 | 1133 | IPR023298 | - | |
Lcy7g0228 | 1227 | NCBIfam | phospholipid-translocating P-type ATPase | 60 | 1141 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Lcy7g0228 | 1227 | FunFam | Phospholipid-transporting ATPase IC | 420 | 432 | - | - | |
Lcy7g0228 | 1227 | Pfam | Cation transport ATPase (P-type) | 519 | 616 | - | - | |
Lcy7g0228 | 1227 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 488 | 694 | IPR023299 | GO:0000166(InterPro) | |
Lcy7g0228 | 1227 | Gene3D | - | 535 | 688 | IPR023299 | GO:0000166(InterPro) | |
Lcy7g0228 | 1227 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 425 | 431 | IPR018303 | - | |
Lcy7g0228 | 1227 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 883 | 1133 | IPR032630 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g1623 | Lcy-Chr1:16568295 | Lcy7g0228 | Lcy-Chr7:1985149 | 5.46E-217 | dispersed | |
Lcy7g0228 | Lcy-Chr7:1985149 | Lcy7g0397 | Lcy-Chr7:3379038 | 0 | dispersed | |
Lcy7g0228 | Lcy-Chr7:1985149 | Lcy5g2449 | Lcy-Chr5:47270391 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy7g0228 | K14802 | - | csv:101207069 | 2318.5 |