Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0233 | ATGGCAACAGAGGACGTGAAGCTTCTGGGTGCGTGGGCTAGTCCATTTGTGATCAGGGTCAGAATCGCCCTCAACATCAAATCTCTAAACTATGAATTTCTTCAGGAAACGCTCGGATCCAAGAGCCAACTCCTCCTCGAATCCAACCCTGTTCACAAGAAAATCCCTGTTCTCATTCACCAAAATAAGCCCATCGCCGAATCCTTGATCATCGTTCAGTATATTGACGAAGTCTGGTCCTCTGCTCCTTCCATCCTTCCCTCCGATCCTTACGATCGCGCCATGGCTCGATTTTGGGCTGCCTTTGCCGACGACAAGTTTTTCCCACCGATGCGGGCGACGATGGGCGCAGAAGAGGAAGTGAAAAGGGGGCTCATCGATCAAGTGGTGGAAGCGATCGGTTTATTGGAAGAAGCTTTTGGGAAGCTGAGCAGAGGAAAGGCATTCTTCAATGGAGACAGTATTGGGTTTCTTGACATTGCTTTTGGGTCGTTTTTAGGATGGCTCAGGGTGACTGAAGTATCGAATGGCGTGAAACTGATCGACGGAGAGAAGACTCCAGGGCTGGCCGGATGGGCTGAGAAGTTCTGTGCAGATGGCGCTGTGAAAGATGTGATGCCCGAAACTGAAAAGCTTCTGGAGTTTGCTAAGGTTATTGAAGCCAAAATGAAGGGAGAACATCCAAAATAA | 690 | 49.13 | MATEDVKLLGAWASPFVIRVRIALNIKSLNYEFLQETLGSKSQLLLESNPVHKKIPVLIHQNKPIAESLIIVQYIDEVWSSAPSILPSDPYDRAMARFWAAFADDKFFPPMRATMGAEEEVKRGLIDQVVEAIGLLEEAFGKLSRGKAFFNGDSIGFLDIAFGSFLGWLRVTEVSNGVKLIDGEKTPGLAGWAEKFCADGAVKDVMPETEKLLEFAKVIEAKMKGEHPK | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2040262 | 2041265 | + | Maker00025817 | Lcy7g0233 | 637065 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0233 | 229 | SFLD | Main.3: Omega- and Tau-like | 2 | 225 | IPR045073 | - | |
Lcy7g0233 | 229 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
Lcy7g0233 | 229 | SFLD | Glutathione Transferase (cytosolic) | 2 | 225 | IPR040079 | - | |
Lcy7g0233 | 229 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 215 | IPR010987 | - | |
Lcy7g0233 | 229 | SUPERFAMILY | GST C-terminal domain-like | 77 | 220 | IPR036282 | - | |
Lcy7g0233 | 229 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 217 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Lcy7g0233 | 229 | CDD | GST_C_Tau | 90 | 219 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Lcy7g0233 | 229 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Lcy7g0233 | 229 | FunFam | Glutathione S-transferase GSTU6 | 1 | 86 | - | - | |
Lcy7g0233 | 229 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 77 | IPR004045 | - | |
Lcy7g0233 | 229 | CDD | GST_N_Tau | 6 | 79 | - | - | |
Lcy7g0233 | 229 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 194 | - | - | |
Lcy7g0233 | 229 | FunFam | Glutathione S-transferase U9 | 86 | 226 | - | - | |
Lcy7g0233 | 229 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 83 | IPR004045 | - | |
Lcy7g0233 | 229 | Gene3D | - | 86 | 228 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0402 | Lcy-Chr2:3373657 | Lcy7g0233 | Lcy-Chr7:2040262 | 2.08E-55 | dispersed | |
Lcy6g0691 | Lcy-Chr6:6703209 | Lcy7g0233 | Lcy-Chr7:2040262 | 7.34E-50 | dispersed | |
Lcy6g0692 | Lcy-Chr6:6708281 | Lcy7g0233 | Lcy-Chr7:2040262 | 9.57E-44 | dispersed | |
Lcy7g0233 | Lcy-Chr7:2040262 | Lcy8g0116 | Lcy-Chr8:2716886 | 4.97E-08 | dispersed | |
Lcy7g0233 | Lcy-Chr7:2040262 | Lcy7g0278 | Lcy-Chr7:2422927 | 6.62E-51 | transposed | |
Lcy7g0233 | Lcy-Chr7:2040262 | Lcy5g2548 | Lcy-Chr5:48246151 | 4.54E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy7g0233 | K00799 | - | vvi:100245065 | 324.709 |