Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0235 ATGCCTTCTCCATCTTCATCTCTTTCTATTTCCGCCATTGTTGTCTTCTTCCTCGAGCTCTGTCCTCTGTTTTCAGCGGATGGGCAGGTTGCATCTTTGAGGATTCCTTGTCCGCCTTTCTCTTCCAAACCCGTTTTCCCATTTTCCTCTGAGCCTGGTTATGGGCATCCTTCTTTTCAGGTACGTTGCTCTTCTCCCCACTCTGTTATTTCCATCAATGGAGTTTCTTATTCTCTGTTGAGTTTCAATACGAGCTCCACCACTCTCCGTCTTTCTCCTCTTCCACTCAATGTCACTCCCACTGTCAGAGAATCGAACCGCAGCTGTTTTTCTGCTCGTTTCTCTTCCATTCCGAGCCGCTCGATTAATCTCTCGGGCTCCCCGTTTAGAATCTCAGATGGGTATTGCTCTAGACTCTCTCTTCTTAGCCCCTGTTCGCGTCCGAGTCTACCCAATTGCAGCCATTGTCCTTGGGAGTGCAGTCTTATCAAGAAACCAGTTAATTTGCTCGATGGATGCGGCGTCGAGCATCAGTCCTTCTCGGAGCAAGGTTGTCAGGGCGAGGTCTTGGAGTACTTGGACAAATTTCTGAAATTGGGGCTTGACGTCGAGTGGGATACAGATCAGGACCCTTACTTTATCAAGTGTAATGATTGTGAAGCTAAAAATGGTGATTGTGGTTTCAATTCCTCAGACCCAGATAGGCAATTCGTTTGCTATCATGCTCAAACCCGACATCATGTTCAAACTCGATACGCATACCCTAATAGAATCGCGATTTTATCCTCTGTTTTCGCGTTGATGTGCTTGTTATTGGTTATTGCGGTGACGATGGCTTTTTTCAGGTCGAGATGGTTGAGATCCCTCGCCATTGAAGTAGACCCCACAACCCAGTTCCTCAGTCGTCATCGTTCACCGAATCTTCTCCCACCAGTTTTCCCCTACGAAGAACTCGAATCCTCTACTAATCGATTCGACCCCAAGAGGAAACTGGGCGACGGTGGATTTGGGTCTGTTTATTTGGGCCAGCTCAACGATGGCCGATTAGTGGCCGTGAAGTATCTTCACAAGCACCACGCCGCCGCCGCCGCCCCCTCCGGCAGGGCTTTCTTCACCAAGTCCTTCTGTAACGAAATCTTGATTCTTTCTTCGATTAATCACCCAAATCTCGTGAGGTTGCATGGGTATTGTAGCGACCCGAGAGGGCTGATTCTTGTCTATGATTATGTCCCAAATGGGACGCTCGCCGACCATCTCCATGGCCCTAAGAGCTTGTACCGGAAGGGATCTCTGAACTGGCAAGTTAGGATTGATATTGCTCTGCAAATCGCCATGGCTATGGAGTATTTGCATTTCTCTGTCGTGCCGCCGATTGTTCACAGAGACATTACCTCTTCCAATATTTTTGTGGAGAAAGATATGAGAATCAAAGTCGGGGATTTTGGGCTTTCGAGGCTGCTGGTTTTCTCTGATACGACGTCGTCCTCATCTGGGTATGTCTGCACCGGACCTCAGGGGACACCCGGTTACTTGGATCCGGATTACCACCGGTCGTTCCGGTTGACGGAGAAGAGTGACGTGTACAGCTTCGGAGTTGTGTTATTGGAGCTGATTTCTGGTCTGAAAGCAGTGGATCAGAGTCGAGAGAGAAGAGAAATGGCGCTAGCGGATCTGGTAGTCTCGAAGATCCAAATGGGTCAGCTTCATCAGGTGGTGGACTCCGTTTTGGGTATCGACGGCGAGGTAATCGACGGCGTTGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGGCGGACAAGGACGACCGCCCCGATGCCAAGGAGATCGTGGAGGAGCTCCGGCGGATCCGGAACTGCACACGTGGAGGGGTCCGGTCGTCGATTTCAAACGTGAGTGCTGACGTGGCGAGAAGTTGA 1920 50.47 MPSPSSSLSISAIVVFFLELCPLFSADGQVASLRIPCPPFSSKPVFPFSSEPGYGHPSFQVRCSSPHSVISINGVSYSLLSFNTSSTTLRLSPLPLNVTPTVRESNRSCFSARFSSIPSRSINLSGSPFRISDGYCSRLSLLSPCSRPSLPNCSHCPWECSLIKKPVNLLDGCGVEHQSFSEQGCQGEVLEYLDKFLKLGLDVEWDTDQDPYFIKCNDCEAKNGDCGFNSSDPDRQFVCYHAQTRHHVQTRYAYPNRIAILSSVFALMCLLLVIAVTMAFFRSRWLRSLAIEVDPTTQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHAAAAAPSGRAFFTKSFCNEILILSSINHPNLVRLHGYCSDPRGLILVYDYVPNGTLADHLHGPKSLYRKGSLNWQVRIDIALQIAMAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFSDTTSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRERREMALADLVVSKIQMGQLHQVVDSVLGIDGEVIDGVEAVAELAFRCVAADKDDRPDAKEIVEELRRIRNCTRGGVRSSISNVSADVARS 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2049762 2051681 - Maker00026012 Lcy7g0235 637067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0235 639 ProSiteProfiles Protein kinase domain profile. 325 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0235 639 FunFam Putative serine/threonine-protein kinase At1g18390 family 301 409 - -
Lcy7g0235 639 ProSitePatterns Tyrosine protein kinases specific active-site signature. 458 470 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0235 639 Pfam Protein kinase domain 327 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0235 639 SUPERFAMILY Protein kinase-like (PK-like) 305 614 IPR011009 -
Lcy7g0235 639 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524(InterPro)
Lcy7g0235 639 CDD STKc_IRAK 331 617 - -
Lcy7g0235 639 Gene3D Phosphorylase Kinase; domain 1 300 409 - -
Lcy7g0235 639 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 45 622 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Lcy7g0235 639 Gene3D Transferase(Phosphotransferase) domain 1 410 631 - -
Lcy7g0235 639 Pfam Wall-associated receptor kinase C-terminal 188 242 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0235 Lcy-Chr7:2049762 Lcy7g0490 Lcy-Chr7:4359456 2.45E-69 dispersed
Lcy7g0235 Lcy-Chr7:2049762 Lcy2g0422 Lcy-Chr2:3532563 2.86E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66063 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0235 - - - 0.0