Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0308 | ATGAGCTCCGAACCGTCTGGAACTGCCGCCGGTTCGCCGGCGCCGGGGAGCGCAGGAGGTAGGGGAAACTCGTCGTCGTCATCGGCATCGGGGACGAACAGGGAGAAGCAGAAGGAGAAAGCGAGGGTGAGTAGAACGTCGCTGATATTGTGGCACGCTCATCAGAACGATTCTACTGCTGTTCGCAAGCTTCTGGAGGAGGATCAGTCCCTCGTCCATGCCAGAGATTACGACAGCCGCACACCTCTCCATGTTGCATCGCTTCATGGCTGGATCGAAGTTGCCAAGTGTTTGATTGAACACGGTGCTGATGTTAATGCCCAAGATCGCTGGAAGAACACTCCGCTTGCTGATGCGGAAGGAGCTAAAAAGCATGGCATGATCGAGTTGTTGAAATCGTATGGCGGCCTGTCCTATGGCCAAAATGGAAGCCATTTTGAACCAAAGCCTGTTCCTCCCCCTCTGCCGAATAAATGCGACTGGGAAATTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGGGGTCCTTCGGTGAAATTTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTCAAACGTATTCTTCCATCACTTTCAGATGATAGACTTGTGATCCAGGACTTCCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATAGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCGCTAATGTTAATCACTGAATACTTAAGAGGGGGTGATCTTCACCAGTACCTCAAGGATAAAGGTTCGCTCAGTCCTGCAACGGCCATCAATTTTGCACTGGACATCGCCAGGGGAATGGCTTATCTCCACAATGAGCCAAATGTTATAATTCATCGTGACCTAAAACCAAGGAACGTTCTTTTAGTCAACTCCGGAGCGGACCATCTAAAAGTTGGTGATTTCGGTCTAAGCAAGCTCATCAAGGTTCAGAATTCACATGATGTTTACAAAATGACTGGCGAGACTGGGAGCTACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGAAAATATGATAAGAAGGTGGACGTGTTTTCTTTTGCAATGATATTATACGAGATGCTTGAGGGAGATCCTCCACTGGCAAATTATGAGCCTTATGAAGCTGCCAAATACGTAGCTGAAGGTCATAGACCAATGTTCCGTTCGAAAGGATACCTTCCTGTTCTAAGAGAGTTAACAGAAGAATGTTGGGCATCTGATATGAACAAGAGACCTTCTTTCTTGGAAATTCTCAAAAGACTTGAAAGGATCAAGGAAAACCTACCAACTGAAAATCACTGGAATTTGTTTAATGCATAA | 1341 | 46.61 | MSSEPSGTAAGSPAPGSAGGRGNSSSSSASGTNREKQKEKARVSRTSLILWHAHQNDSTAVRKLLEEDQSLVHARDYDSRTPLHVASLHGWIEVAKCLIEHGADVNAQDRWKNTPLADAEGAKKHGMIELLKSYGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPATAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPMFRSKGYLPVLRELTEECWASDMNKRPSFLEILKRLERIKENLPTENHWNLFNA | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2631918 | 2638340 | - | Maker00026008 | Lcy7g0308 | 637140 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0308 | 446 | Gene3D | - | 20 | 144 | IPR036770 | - | |
Lcy7g0308 | 446 | PIRSF | ILK | 5 | 446 | - | - | |
Lcy7g0308 | 446 | ProSiteProfiles | Protein kinase domain profile. | 170 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0308 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 289 | 301 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy7g0308 | 446 | FunFam | serine/threonine-protein kinase STY8 | 23 | 144 | - | - | |
Lcy7g0308 | 446 | SUPERFAMILY | Ankyrin repeat | 49 | 136 | IPR036770 | - | |
Lcy7g0308 | 446 | CDD | STKc_MAP3K-like | 176 | 428 | - | - | |
Lcy7g0308 | 446 | MobiDBLite | consensus disorder prediction | 18 | 32 | - | - | |
Lcy7g0308 | 446 | FunFam | serine/threonine-protein kinase STY46-like | 163 | 249 | - | - | |
Lcy7g0308 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 168 | 440 | IPR011009 | - | |
Lcy7g0308 | 446 | ProSiteProfiles | Ankyrin repeat region circular profile. | 78 | 110 | - | - | |
Lcy7g0308 | 446 | Pfam | Protein tyrosine and serine/threonine kinase | 174 | 428 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy7g0308 | 446 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Lcy7g0308 | 446 | ProSiteProfiles | Ankyrin repeat profile. | 78 | 110 | IPR002110 | GO:0005515(InterPro) | |
Lcy7g0308 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 176 | 197 | IPR017441 | GO:0005524(InterPro) | |
Lcy7g0308 | 446 | SMART | ANK_2a | 78 | 107 | IPR002110 | GO:0005515(InterPro) | |
Lcy7g0308 | 446 | Pfam | Ankyrin repeats (3 copies) | 52 | 133 | IPR002110 | GO:0005515(InterPro) | |
Lcy7g0308 | 446 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 22 | 432 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Lcy7g0308 | 446 | Gene3D | Phosphorylase Kinase; domain 1 | 155 | 249 | - | - | |
Lcy7g0308 | 446 | FunFam | Integrin-linked protein kinase family | 249 | 444 | - | - | |
Lcy7g0308 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 250 | 443 | - | - | |
Lcy7g0308 | 446 | SMART | serkin_6 | 170 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy7g0308 | Lcy-Chr7:2631918 | Lcy8g1615 | Lcy-Chr8:42719413 | 2.96E-59 | dispersed | |
Lcy8g1720 | Lcy-Chr8:43716715 | Lcy7g0308 | Lcy-Chr7:2631918 | 4.20E-19 | dispersed | |
Lcy7g0308 | Lcy-Chr7:2631918 | Lcy1g0240 | Lcy-Chr1:2179730 | 6.75E-76 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66066 | None | None | None | None | Lcy | PK |
Pathway information
