Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0314 | ATGGGTGATGATGAAGAACAGCTGCCACCGTCGTCAGCGCCGCCTCCGCCGTCGAAATCTAAGGCACTTCCGTTGAGGCCAACTATTAATCTGCCGCCAAGGACCTCTATGGAGTCGCTCTTCAGCGGTGGGCCGGGTTTGGGAAGCGGGTTTAGCCCAGGACCCATGACCCTCGTCTCGAGCTTCTTCTCCGATTCCGACGACTGCAAGTCTTTTTCTCAGCTCCTCGCCGGAGCTATGGCGTCGCCGGTGGCTGTTCCTCCGAGGGCGTCTGAGCTCAAGGGCCCTGCCGGTCTGCTCGATTCTCCGGGGCTTTTTTCTCCCAGTCAGGGACCTTTTGGAATGACACATCAGCAGGCTTTGGCTCAGGTTACTATGCAGGCTGCACAAACCTATTCTCATAAGCAAATACAAGGAGAATCTTTTTCTTCATTGGTACCACCCTCTGCATCCTCCTCAGAGCTTTTGACAACCTTTCCCGGCGAGAAGACTAAAGATCAGCCGGTGCCACCTTCATTGCTGAACTCTGCGGTTGCATCCAAGGAATCATCGGATATCTCTCAATCAGATCAGAGATTGCAATCTTCTTCGTGTAATGTTGATAGGCCTGCTGATGACGGCTACAACTGGAGAAAATATGGACAGAAACAAGTGAAGGGCAGTGAATTTCCTCGAAGTTACTACAAGTGCACGCATCCGAATTGTCCTGTCAAGAAAAAGGTCGAACGATCTCTGGAAGGTCAAGTCATTGAAATTATCTATAAGGGTGAGCACAACCACAAACGACCTCAACCAAACAAGCGGGCAAAGGATGTTGGAAATTCTAATGGATGTTCAAGTATTCATGGAAATCCTAAGCTGTCTTCTCAAGTTCAGAGTGGATATTTGAATAAATTGAATGATCAGCAGACGGCTGTGTCTTCCATTGCAAAGAAGGATCAAGAATCGAGTCATGTTACACACGAACAGTTGTCCAGTACTAGTGATGGTGAGGGAGGGAGTGAGATAGAAACTGGAGTGAGTCGAAAAGATGAAGATGAACCTGACGCCAAGAGACGGAATACTGAGGTTAGAGTTTCTGAGCCAGCATCTTCTCATAGGACACTCACAGAATCCAGAATCATTGTGCAGACTACAAGTGAAGTCGATCTATTGGATGATGGCTACAGGTGGCGAAAGTATGGGCAGAAAGTTGTTAAAGGCAACCCTTACCCCAGGAGCTATTATAAATGCACAACTCCGGGATGCAATGTTCGTAAACATGTTGAGAGAGCTTCGACAGACCAAAAAGCTGTCATAACAACGTATGAGGGCAAACACAATCATGATGTTCCAGCTGGTAAAATCAGCAGCCACAGTACAGTCAACAGTAACGTTCCTCAGCTAAAATCACAAAATATAGCTACTGATAACAACACTGATCCTGGGAACTCTCGTCAACAGCCTGTTGGACTTCTACGGTTAAAGAAAGAACAAATAACGTAG | 1485 | 47.34 | MGDDEEQLPPSSAPPPPSKSKALPLRPTINLPPRTSMESLFSGGPGLGSGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVAVPPRASELKGPAGLLDSPGLFSPSQGPFGMTHQQALAQVTMQAAQTYSHKQIQGESFSSLVPPSASSSELLTTFPGEKTKDQPVPPSLLNSAVASKESSDISQSDQRLQSSSCNVDRPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGQVIEIIYKGEHNHKRPQPNKRAKDVGNSNGCSSIHGNPKLSSQVQSGYLNKLNDQQTAVSSIAKKDQESSHVTHEQLSSTSDGEGGSEIETGVSRKDEDEPDAKRRNTEVRVSEPASSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDQKAVITTYEGKHNHDVPAGKISSHSTVNSNVPQLKSQNIATDNNTDPGNSRQQPVGLLRLKKEQIT | 494 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2684309 | 2687844 | - | Maker00026173 | Lcy7g0314 | 637146 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 269 | 313 | - | - | |
Lcy7g0314 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 377 | 445 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | Gene3D | WRKY domain | 188 | 264 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | Gene3D | WRKY domain | 370 | 446 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 320 | 334 | - | - | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 464 | 480 | - | - | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 140 | 215 | - | - | |
Lcy7g0314 | 494 | ProSiteProfiles | WRKY domain profile. | 380 | 445 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 255 | 371 | - | - | |
Lcy7g0314 | 494 | SMART | WRKY_cls | 204 | 262 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | SMART | WRKY_cls | 385 | 444 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 169 | 202 | - | - | |
Lcy7g0314 | 494 | Pfam | WRKY DNA -binding domain | 386 | 443 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | Pfam | WRKY DNA -binding domain | 205 | 261 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 140 | 160 | - | - | |
Lcy7g0314 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 203 | 263 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 336 | 360 | - | - | |
Lcy7g0314 | 494 | ProSiteProfiles | WRKY domain profile. | 205 | 263 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lcy7g0314 | 494 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 136 | 465 | IPR044810 | GO:0003700(InterPro) | |
Lcy7g0314 | 494 | FunFam | WRKY transcription factor 33 | 372 | 438 | - | - | |
Lcy7g0314 | 494 | FunFam | WRKY transcription factor | 191 | 264 | - | - | |
Lcy7g0314 | 494 | MobiDBLite | consensus disorder prediction | 464 | 494 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0178 | Lcy-Chr2:1427287 | Lcy7g0314 | Lcy-Chr7:2684309 | 3.34E-39 | dispersed | |
Lcy6g0540 | Lcy-Chr6:5106307 | Lcy7g0314 | Lcy-Chr7:2684309 | 2.13E-21 | dispersed | |
Lcy6g1902 | Lcy-Chr6:39836153 | Lcy7g0314 | Lcy-Chr7:2684309 | 2.50E-80 | dispersed | |
Lcy7g0314 | Lcy-Chr7:2684309 | Lcy8g1705 | Lcy-Chr8:43605441 | 1.74E-71 | dispersed | |
Lcy5g0252 | Lcy-Chr5:2378355 | Lcy7g0314 | Lcy-Chr7:2684309 | 2.82E-64 | transposed | |
Lcy10g2040 | Lcy-Chr10:44502823 | Lcy7g0314 | Lcy-Chr7:2684309 | 3.22E-141 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20377 | None | None | None | None | Lcy | TF |
Pathway information
