Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0331 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTCGCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTTGCTAAACTAGATGTTGAGCTAACCGTGGAGGAGAGGAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGAGCTTCTTGGCGTATCATGTCCTCAATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAGAGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAACCTCGGCAGAAGCATCGACTGCTTCGAGCACCGCAAATACCGAACTCCCATCAACCCACCCGATCCGTCTTGGCCTTGCTCTCAACTTTTCTGTCTTTTACTATGAGATTATGAATTCTCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAAGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAATCTCACCCTCTGGACATCTGATTTACCCGAAGATGGAGGTGAAGAGAACTTCAAAGGTGAGGATTCCAAACCGGCAGCAGCACCAGCCCCCGAGGAGATTGTAAAGGAAAGTCTCATTTTTCTCTTCATTGTATGCTCCAGTTTGGGAGCCAAAACCTTTCATGGATTATCTTCATCAACAACTGTTACAGGGTTGAGAAAGGAGTGGCTTAAAAGGCTTTTGGATGTTGGGTAG 822 45.74 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICTDILTIIDKHLIPSSTSAEASTASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKGEDSKPAAAPAPEEIVKESLIFLFIVCSSLGAKTFHGLSSSTTVTGLRKEWLKRLLDVG 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2797651 2802317 + Maker00026167 Lcy7g0331 637163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0331 273 ProSitePatterns 14-3-3 proteins signature 2. 183 202 IPR023409 -
Lcy7g0331 273 Coils Coil 161 181 - -
Lcy7g0331 273 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Lcy7g0331 273 Coils Coil 14 34 - -
Lcy7g0331 273 Pfam 14-3-3 protein 14 121 IPR023410 -
Lcy7g0331 273 Pfam 14-3-3 protein 123 201 IPR023410 -
Lcy7g0331 273 SUPERFAMILY 14-3-3 protein 7 203 IPR036815 -
Lcy7g0331 273 SMART 1433_4 8 214 IPR023410 -
Lcy7g0331 273 Gene3D - 1 122 IPR036815 -
Lcy7g0331 273 Gene3D - 123 214 IPR036815 -
Lcy7g0331 273 PANTHER 14-3-3 PROTEIN 7 121 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Lcy7g0331 273 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Lcy7g0331 273 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0331 Lcy-Chr7:2797651 Lcy9g1731 Lcy-Chr9:42510263 2.65E-99 dispersed
Lcy7g0331 Lcy-Chr7:2797651 Lcy13g1561 Lcy-Chr13:34461817 1.85E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0331 K06630 - csv:101221275 380.178