Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0333 | ATGTGCTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTTGGTCTGCCAAAACGTGCTCCGATAGATAAGGAGCTCTTGCAATTATTGACTCCAGTTTCGCTATGCCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTCTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCCGTTGTTTTAGGTGTGTCCATGGCATCACTAACGGAACTTTCCTTCAATTGGACTGGGTTTGTTAGTGCAATGATTTCAAACATTGCATTTACTTACAGAAGTATCTACTCGAAGAAGGCAATGACAGGAATGGACAGTACAAACGTGTATGCATACACCTCAATAATCGCTCTTTTGTTTTGCATTCCTCCAGCAGTAATGATCGAGGGACCGCAGTTGCTGCAGCATGGTTTCAAGGATGCAATTGCCAAAGTGGGTCTTCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGCATGTTTTATCATCTGTACAATCAGCTTGCCACTAATACTCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATCGTTGTTTTTGGCAACAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAGACTTGGAAGAACAAAAACGGAGGTCTGCTAAAATTCCAGCATCATAG | 837 | 42.53 | MCFVSVIHLLVGVGYCLISWAVGLPKRAPIDKELLQLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKADLEEQKRRSAKIPAS | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2808804 | 2813473 | + | Maker00025876 | Lcy7g0333 | 637165 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0333 | 278 | PANTHER | SOLUTE CARRIER FAMILY 35 | 2 | 260 | IPR050186 | GO:0005794(PANTHER)|GO:0015297(PANTHER) | |
Lcy7g0333 | 278 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 153 | 260 | - | - | |
Lcy7g0333 | 278 | Pfam | Triose-phosphate Transporter family | 3 | 259 | IPR004853 | - | |
Lcy7g0333 | 278 | NCBIfam | Tpt phosphate/phosphoenolpyruvate translocator | 3 | 269 | IPR004696 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lcy7g0333 | 278 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 14 | 108 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0317 | Lcy-Chr1:2801873 | Lcy7g0333 | Lcy-Chr7:2808804 | 8.11E-163 | dispersed | |
Lcy6g1394 | Lcy-Chr6:20446449 | Lcy7g0333 | Lcy-Chr7:2808804 | 2.18E-59 | dispersed | |
Lcy7g0333 | Lcy-Chr7:2808804 | Lcy9g1211 | Lcy-Chr9:36492485 | 1.53E-64 | dispersed | |
Lcy7g0333 | Lcy-Chr7:2808804 | Lcy1g0432 | Lcy-Chr1:3821619 | 6.92E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy7g0333 | K15283 | - | csv:101221040 | 498.819 |