Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0333 ATGTGCTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTTGGTCTGCCAAAACGTGCTCCGATAGATAAGGAGCTCTTGCAATTATTGACTCCAGTTTCGCTATGCCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTCTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCCGTTGTTTTAGGTGTGTCCATGGCATCACTAACGGAACTTTCCTTCAATTGGACTGGGTTTGTTAGTGCAATGATTTCAAACATTGCATTTACTTACAGAAGTATCTACTCGAAGAAGGCAATGACAGGAATGGACAGTACAAACGTGTATGCATACACCTCAATAATCGCTCTTTTGTTTTGCATTCCTCCAGCAGTAATGATCGAGGGACCGCAGTTGCTGCAGCATGGTTTCAAGGATGCAATTGCCAAAGTGGGTCTTCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGCATGTTTTATCATCTGTACAATCAGCTTGCCACTAATACTCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATCGTTGTTTTTGGCAACAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAGACTTGGAAGAACAAAAACGGAGGTCTGCTAAAATTCCAGCATCATAG 837 42.53 MCFVSVIHLLVGVGYCLISWAVGLPKRAPIDKELLQLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKADLEEQKRRSAKIPAS 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2808804 2813473 + Maker00025876 Lcy7g0333 637165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0333 278 PANTHER SOLUTE CARRIER FAMILY 35 2 260 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Lcy7g0333 278 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 260 - -
Lcy7g0333 278 Pfam Triose-phosphate Transporter family 3 259 IPR004853 -
Lcy7g0333 278 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 3 269 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy7g0333 278 SUPERFAMILY Multidrug resistance efflux transporter EmrE 14 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0317 Lcy-Chr1:2801873 Lcy7g0333 Lcy-Chr7:2808804 8.11E-163 dispersed
Lcy6g1394 Lcy-Chr6:20446449 Lcy7g0333 Lcy-Chr7:2808804 2.18E-59 dispersed
Lcy7g0333 Lcy-Chr7:2808804 Lcy9g1211 Lcy-Chr9:36492485 1.53E-64 dispersed
Lcy7g0333 Lcy-Chr7:2808804 Lcy1g0432 Lcy-Chr1:3821619 6.92E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0333 K15283 - csv:101221040 498.819