Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0345 ATGGATCCCCCCACCATCTACCGCTCTCGCAGAACCACCAACAAATCTGACCTCTACTCCACAGTTGTCATCCATTCCAATTCCGATTCCGACTCCGACAACAATCCCACCGATCGGAACCTTCAGCGCCGACGAAGGCACCCGAGCGAAGGACAAGACCCATACGCCACAATGGTCTACAAGGACGTCGACAAGGGCCGCGAGGATGACGATGACGATGATTCCTCTCTCCCTCCTCTCCTTAAACGTCTTCCCAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACGATGATTTTGGATTTGATCACGAGACTGAAGATTTTGGTACTATGATCGTCAAGACGGAAAGGAATCGTCCTCGCAATCGCTCTGGGTCTTCATCAGCTTCGACGAAGCCTCGAAGTTCGCCGTTGCCATTCGTGAATTTTCAGACCGGGAGCCCTGGAACGAGAGGAGGCGGTAGAGGTGGTAGTGAAGAAGGCGACGAGAGCGAGGAAGATGATGGTGATGGGTTTTCGACGTTTGTGGTGAGGTCCACGGCGAAGTCGCGGAGCAGAGAATCTGTTAGTGGGACTATTCTTCGAAGGACGGGCGGTAGTCGTAGTGATACTAGAGATGGAGGCGGAGGACTTGAGGGGTCCACGTTGGGCAGAGCGGTGGCGAGCATGCAAGGAATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAGGGGGAATGGATCCCCGAGGAGTGAGGAAGGCGGTGGTCGGATGTGCAGTAAGGTATCTTCGAGTTCGATTCCTGAAAGCATCACCAGGGAAGATCCAAATTCTAAGTATGAATTGCTCAACGAACTCGGAAAGGGGTCCTATGGGGCTGTTTATAAAGCAAGGGATATTAAGACCTCTGAGCTGGTTGCTATAAAGGTTATTTCTTTGTGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCAAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTACCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACTGAGGAAGCTTTAGAGGAATATCAGATAGCATATATCTGTAGGGAGGCATTGAAGGGCCTCGCTTATCTTCACTCAATATTCAAAGTTCACAGAGATATCAAGGGCGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGTGATTTTGGAGTTGCAGCCCAGCTAACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACCCCACATTGGATGGCTCCCGAAGTTATTCAGGAAAGTCGGTACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCTATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCCTGGTGTTCCACGATTTTGTTGCGAAGTGTCTGACAAAAGATCCTCGTTCACGTCCTGCTGCTTCTGAGATGTTGAAGGCAATGCAAATGGAGGTGCTTGCTGTCTGCTTAGGCTGTTCTGTTCTGAGATGGGATGGGGATTTGAACCTATGCCTCTTAGAGGAGGTAGAGGAATCTATTGGCTTCAGAACTTGGCCAATGATTAGGAACCTTTTGGTGTTCTCTAGTCTTAGCGAGGTGGCTGAACAAAGATATGGAGGAAAACACAAATTCATTGAGAAATGCAGATGTGGGGCATCGGCAATGTTGCCCAAGATTGAAAAGGCTAGGAAAATTAGGACTTTGATGGCTCAGCAAGCACATAGTGTTCCTCCAGATGCATCAGGAGATGGTACTATAGTAGCTGCAAAGTTGAATCAAGATTATGGAGATACTGTTCCTTCAAAGCCTCAGAATATTGGACTTCAGGTAGCAAATGAAATGCCTGCTGGTGGCACTTGGAGGAAGCTAGAGCAATCAGGTACGGAACTTGTAGCAGAAGGTACTTTTGGCACTGTAATAGTCCATGATGGAGATGAGAATGATAAGGTGTCTCAAATGGATATTGGCAATGCTGAAACACCAACTGGTCCTTTAAGCAATGAAAGCCCATCCATTAGTGTAACTGGAGTCAAAATTGACTCTAGTGTGGTGGATGGTACGGGAGGTATTGTAAATAATATTCTTGATGGAAAATCGGATCCCACCATGAATGCATCTTCACCTTCATTTTTGGGTATTCATGAGCTTGGCACCTTGAAGAATGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGATAAGCTTTGGTCCATTTATGCAGCGGGTAATACTGTACCCATTCCGTTCTTGAGGGCTACTGATATATCCCCTGTTGCTTTGTTATCTGACAATGTCCTCGGAGGCATGCAGCAAGATAATAGGGGTGCTGTTGCAGTGGAAGCGCTTCAGGAACTTTTCACTGGTGATGGACAATCAAAAAAGGGTCGCAGGGGACAAAATGAGATGCCCCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGTCCGACACTATTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTATGAAGACATGCCACTTCAGGAGTTGCAAGCGACTCAAGAACAACAAACCATTCAAAACCTTTGTGATACACTCAGAACTATCCTCCGTTTGTAG 2727 47.23 MDPPTIYRSRRTTNKSDLYSTVVIHSNSDSDSDNNPTDRNLQRRRRHPSEGQDPYATMVYKDVDKGREDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDDDFGFDHETEDFGTMIVKTERNRPRNRSGSSSASTKPRSSPLPFVNFQTGSPGTRGGGRGGSEEGDESEEDDGDGFSTFVVRSTAKSRSRESVSGTILRRTGGSRSDTRDGGGGLEGSTLGRAVASMQGMGELGFGKQRRGNGSPRSEEGGGRMCSKVSSSSIPESITREDPNSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDPRSRPAASEMLKAMQMEVLAVCLGCSVLRWDGDLNLCLLEEVEESIGFRTWPMIRNLLVFSSLSEVAEQRYGGKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHSVPPDASGDGTIVAAKLNQDYGDTVPSKPQNIGLQVANEMPAGGTWRKLEQSGTELVAEGTFGTVIVHDGDENDKVSQMDIGNAETPTGPLSNESPSISVTGVKIDSSVVDGTGGIVNNILDGKSDPTMNASSPSFLGIHELGTLKNETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPVALLSDNVLGGMQQDNRGAVAVEALQELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 908
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2886853 2898197 + Maker00026102 Lcy7g0345 637177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0345 908 SMART serkin_6 275 532 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0345 908 MobiDBLite consensus disorder prediction 125 154 - -
Lcy7g0345 908 MobiDBLite consensus disorder prediction 179 201 - -
Lcy7g0345 908 FunFam serine/threonine-protein kinase dst1 isoform X1 272 535 - -
Lcy7g0345 908 Pfam Protein kinase domain 275 525 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0345 908 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524(InterPro)
Lcy7g0345 908 MobiDBLite consensus disorder prediction 36 51 - -
Lcy7g0345 908 MobiDBLite consensus disorder prediction 253 268 - -
Lcy7g0345 908 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 228 525 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Lcy7g0345 908 MobiDBLite consensus disorder prediction 107 124 - -
Lcy7g0345 908 MobiDBLite consensus disorder prediction 230 271 - -
Lcy7g0345 908 FunFam Aurora kinase A 267 356 - -
Lcy7g0345 908 MobiDBLite consensus disorder prediction 24 218 - -
Lcy7g0345 908 Gene3D Transferase(Phosphotransferase) domain 1 271 535 - -
Lcy7g0345 908 ProSiteProfiles Protein kinase domain profile. 275 532 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0345 908 CDD STKc_MAP4K3_like 274 525 - -
Lcy7g0345 908 SUPERFAMILY Protein kinase-like (PK-like) 272 530 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0345 Lcy-Chr7:2886853 Lcy9g1314 Lcy-Chr9:37904579 5.28E-72 dispersed
Lcy7g0345 Lcy-Chr7:2886853 Lcy9g0888 Lcy-Chr9:29709833 5.85E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66067 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0345 - - - 0.0