Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0385 ATGGCAATCTCAAATCCCTCTCCAACCCTCGTTTATGGACTGATGGTGCTCTCTGTTTTCTTTGCTCTGAGCCACAGCTTGTATGAGACAGGTGACCCCCCATTGACGTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGTAATGCAGCTTTTATTGTCCGATTGCACTTCCACGACTGCTTTGTCCAGGGGTGCGACGGGTCGGTTCTGCTGGACGACACTATAACATTACAGGGAGAAAAAAAGGCTTCCACCAACATACACTCCCTCAAAGGCTTCAGAATCATAGACAGGATAAAGAACAGCCTTGAATCAGAATGTCCTGGGATCGTTTCTTGTGCAGATATACTCACTGTTGCAGCCAGGGATGCAGTGATTCTGGTAGGCGGCCCTTACTGGGAGGTTCCTCTTGGAAGAAAGGATTCCACAACTGCGAGTTATGAACTTGCAAGCACAAATCTTCCCTCTGCCAACGAGGGGCTTCTGAGCATCATTTCCAAGTTTCTTTATCAGGGTCTTTCTGTCACTGACATGGTAGCTCTATCAGGAGCGCACACTATTGGAATGGCAAGGTGCGAGAATTTCAGGGAAAGAATTTATGGGGATTTCGAAGCAACTTCAGATGCTAACAACCCAATTTCCAAGTCATATCTTGAGAAATTAAGGTCTATTTGCCCCCCAGTTGGGAAAGCTGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGCTCTTTGACAACTCCTATTTCCACATCTTGATGAGAGGAGAAGGGCTTATGAATTCAGACCAGGAATTGTATTCCAGCCTTCTGGGCATGGAAACAAAGGCACTGGTGAAGAAATATGCTGCTGACCCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTCAAGTTGGGAAATATCACCAACTCTGATAGCTTTTTCACTGGGGAAGTTAGGAAAAACTGCAGGTTTATCAACACATGA 1029 45.77 MAISNPSPTLVYGLMVLSVFFALSHSLYETGDPPLTLDYYAKTCPNVLQVVRKEMECAVLSDPRNAAFIVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASTNIHSLKGFRIIDRIKNSLESECPGIVSCADILTVAARDAVILVGGPYWEVPLGRKDSTTASYELASTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSDANNPISKSYLEKLRSICPPVGKAAENNITAMDNVTPELFDNSYFHILMRGEGLMNSDQELYSSLLGMETKALVKKYAADPLAFFQQFSDSMVKLGNITNSDSFFTGEVRKNCRFINT 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3268116 3274836 + Maker00025909 Lcy7g0385 637217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0385 342 PANTHER PEROXIDASE 72-RELATED 17 340 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 FunFam Peroxidase 172 319 - -
Lcy7g0385 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Lcy7g0385 342 Gene3D Peroxidase, domain 2 172 319 - -
Lcy7g0385 342 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
Lcy7g0385 342 Gene3D - 39 341 - -
Lcy7g0385 342 Pfam Peroxidase 51 304 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 FunFam Peroxidase 38 179 - -
Lcy7g0385 342 CDD secretory_peroxidase 35 340 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy7g0385 342 SUPERFAMILY Heme-dependent peroxidases 35 341 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 ProSiteProfiles Plant heme peroxidase family profile. 34 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy7g0385 342 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0385 Lcy-Chr7:3268116 Lcy8g2142 Lcy-Chr8:47576073 7.58E-90 dispersed
Lcy7g0385 Lcy-Chr7:3268116 Lcy13g1039 Lcy-Chr13:22711472 3.00E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0385 K00430 - csv:101216779 597.43