Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0388 | ATGGTTCCAATGGAAATTAGAATACAAGTTTCCATTTTCTTCTTCTTCTTGTGGAATTCTTCTGTAAATGGTTTGCTTACTGCAAAAGGTGTCAACTTTGAAGTGCAAGCCCTGATGGCCATTAAAGCTGCTCTGAAAGATCCACATTCTGTTCTTAATTGGGATGAAAACGCTGTGGATCCTTGTAGCTGGAACATGATCACTTGTTCTCCAGAGAAATTTGTCATCAGCTTAGGAGCTCCAAGTCAGAACTTGTCGGGTAGCCTGTCGCCGAGCATCGGAAATTTGACCAATCTTCAGTCAGTGCTTTTACAGAACAACAATATATCAGGAACAATCCCAATGGAACTTGGGAACATACCAATGCTTGTCACTCTTGATCTTTCCAGCAATGGCTTCCATGGAGAAATTCCCACTTCTCTTTCACATCTTAAGACTCTGCAATATCTGAGGTTAAATAACAACAGTCTTTCTGGGGCTATTCCTTCATCTTTGGCCAATATGACTCAGCTGGCATTGCTGGACCTGTCTTTTAATAATCTGAGTGGCCCATTGCCCAAATTGTTGGCTAAAACCTACAACCTTGCTGGGAATTCGCTCATTTGCTCACCTGGGTCTGAGCATAGCTGCAATGGAACTGCACCACCACTCTTATTTACAGTCAATACGCCTCAAAAAGATCCACAGCCGTCTGGGAGATCCAAGGGCCACAAATTAGCCTTGGCTTTTGGCTCAAGTCTTGGATGCATTTTTCTGCTAACTGTTGGGTTTGGCTTCTTTATTTGGTGGAGGCAACGACACAACCAGCAGATTTTCTTTGATGTTAATGACCAACGATTTGAATCAGTTTGCCTTGGGAACCTGAGGATTTTCCAGTTCAGAGAGCTTCAAGCTGCCACAAACAACTTCAGCAGCAAAAACTTGGTGGGAAAAGGTGGGTTTGGGAATGTATACAAAGGGTACCTTCAAGACGGAACAGTTATAGCTGTAAAGAGGCTAAAAGATGGAAATGCAATGAGAGGAGAGATTCAATTTCAGACTGAAGTTGAGATGATCAGCCTAGCCGTGCACCGGAACCTCCTCCGTCTCTACGGGTTCTGTATGACAACCACAGAGAGACTGTTGGTTTACCCATATATGTCCAATGGCAGCGTTGCATCTCGTCTCAAAGCGAAGCCAGCTCTGGACTGGAGCACGAGGAAAAGAATAGCATTGGGTGCAGCAAGAGGCTTACTGTATTTGCATGAGCAGTGTGACCCCAAGATTATACACAGAGACGTCAAGGCAGCAAATATTTTGCTTGATGATTATTGCGAGGCTGTGGTGGGAGATTTTGGACTGGCAAAGCTGTTGGATCACAGAGATTCACATGTGACAACTGCTGTACGAGGAACTGTTGGCCATATAGCTCCTGAGTATCTATCCACTGGCCAATCCTCTGAGAAAACTGATGTCTTTGGATTTGGAATCCTTCTCCTTGAGTTGATCACTGGACAGAGAGCTCTTGAATTTGGAAAAGCTGCAAATCAGAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCACCAAGAAAAGAAGCTGGAAATATTAGTTGACAAGGATCTAAGGAACAATTACGACCGGATCGAGCTAGAAGAAATGGTTCAAGTAGCTCTCTTATGCACACAGTATCTTCCAACCACCAGACCTAAGATGTCTGAAGTGATCAGAATGCTTGAAGGGGATGGACTTGCGGAGAAATGGGAAGCTTCTCAGAGGACAGATGCAAACAGATACAGAGTCAATGAGTTCTCTTCGGAGCGATATTCAGATCTGACAGACGACTCTTCCCTGCTTGCACAAGCCATGGAACTTTCTGGACCAAGATGA | 1869 | 44.19 | MVPMEIRIQVSIFFFFLWNSSVNGLLTAKGVNFEVQALMAIKAALKDPHSVLNWDENAVDPCSWNMITCSPEKFVISLGAPSQNLSGSLSPSIGNLTNLQSVLLQNNNISGTIPMELGNIPMLVTLDLSSNGFHGEIPTSLSHLKTLQYLRLNNNSLSGAIPSSLANMTQLALLDLSFNNLSGPLPKLLAKTYNLAGNSLICSPGSEHSCNGTAPPLLFTVNTPQKDPQPSGRSKGHKLALAFGSSLGCIFLLTVGFGFFIWWRQRHNQQIFFDVNDQRFESVCLGNLRIFQFRELQAATNNFSSKNLVGKGGFGNVYKGYLQDGTVIAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKAKPALDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLEILVDKDLRNNYDRIELEEMVQVALLCTQYLPTTRPKMSEVIRMLEGDGLAEKWEASQRTDANRYRVNEFSSERYSDLTDDSSLLAQAMELSGPR | 622 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3288478 | 3294527 | - | Maker00025792 | Lcy7g0388 | 637220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0388 | 622 | Pfam | Leucine Rich Repeat | 171 | 190 | IPR001611 | GO:0005515(InterPro) | |
Lcy7g0388 | 622 | Pfam | Leucine Rich Repeat | 147 | 168 | IPR001611 | GO:0005515(InterPro) | |
Lcy7g0388 | 622 | Pfam | Leucine Rich Repeat | 123 | 144 | IPR001611 | GO:0005515(InterPro) | |
Lcy7g0388 | 622 | Pfam | Leucine Rich Repeat | 98 | 119 | IPR001611 | GO:0005515(InterPro) | |
Lcy7g0388 | 622 | Gene3D | Phosphorylase Kinase; domain 1 | 272 | 379 | - | - | |
Lcy7g0388 | 622 | ProSitePatterns | Protein kinases ATP-binding region signature. | 309 | 331 | IPR017441 | GO:0005524(InterPro) | |
Lcy7g0388 | 622 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 13 | 622 | - | - | |
Lcy7g0388 | 622 | SUPERFAMILY | Protein kinase-like (PK-like) | 280 | 573 | IPR011009 | - | |
Lcy7g0388 | 622 | FunFam | Somatic embryogenesis receptor kinase 1 | 272 | 379 | - | - | |
Lcy7g0388 | 622 | ProSiteProfiles | Protein kinase domain profile. | 303 | 558 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0388 | 622 | Pfam | Protein tyrosine and serine/threonine kinase | 306 | 572 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy7g0388 | 622 | SMART | serkin_6 | 303 | 558 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0388 | 622 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 31 | 212 | - | - | |
Lcy7g0388 | 622 | Pfam | Leucine rich repeat N-terminal domain | 32 | 70 | IPR013210 | - | |
Lcy7g0388 | 622 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 380 | 592 | - | - | |
Lcy7g0388 | 622 | SUPERFAMILY | L domain-like | 34 | 203 | - | - | |
Lcy7g0388 | 622 | Gene3D | Ribonuclease Inhibitor | 31 | 212 | IPR032675 | - | |
Lcy7g0388 | 622 | Gene3D | Transferase(Phosphotransferase) domain 1 | 380 | 592 | - | - | |
Lcy7g0388 | 622 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 422 | 434 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1527 | Lcy-Chr10:39732833 | Lcy7g0388 | Lcy-Chr7:3288478 | 1.67E-288 | dispersed | |
Lcy10g2086 | Lcy-Chr10:44921008 | Lcy7g0388 | Lcy-Chr7:3288478 | 3.06E-71 | dispersed | |
Lcy13g1261 | Lcy-Chr13:29715591 | Lcy7g0388 | Lcy-Chr7:3288478 | 3.78E-239 | dispersed | |
Lcy1g0260 | Lcy-Chr1:2349628 | Lcy7g0388 | Lcy-Chr7:3288478 | 5.07E-180 | dispersed | |
Lcy2g0208 | Lcy-Chr2:1646940 | Lcy7g0388 | Lcy-Chr7:3288478 | 1.42E-211 | dispersed | |
Lcy6g0974 | Lcy-Chr6:10234575 | Lcy7g0388 | Lcy-Chr7:3288478 | 1.49E-162 | dispersed | |
Lcy7g0388 | Lcy-Chr7:3288478 | Lcy9g0626 | Lcy-Chr9:20737737 | 2.02E-161 | dispersed | |
Lcy7g0388 | Lcy-Chr7:3288478 | Lcy7g0396 | Lcy-Chr7:3370972 | 4.01E-77 | proximal | |
Lcy10g2094 | Lcy-Chr10:45009126 | Lcy7g0388 | Lcy-Chr7:3288478 | 2.53E-284 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66068 | None | None | None | None | Lcy | PK |
Pathway information
