Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0396 ATGGCGGCAGTATCACCGGCGCCTAATTCATCTCCGTCGCCGGCTTCTCCTTCCTCACCATCTCCGCCGCCTCCCGTCGCATCTACTCCGCCGCCCAATACTCCGTCACCGTCGCCGCCACAACCTCCTTCTCCGCCGCCGCAACAATCGCCTCCTCCGAATCCTTCTGGCCCTACAACTCCTACTCCGTCACCACCAGGTCCGTCGTCTCCTCCTCCGCCATCTCGTCAACCATCTGCTACTCCACCTCCGCCTGCTTCTGGAACTCCGCCGCCACAAACACCCGCATTGTCTCCTCCGCCGCCTCGAACCATTTCGCCGGCAACTCCACCCCCAACTCCGTCAAATGCTCCGCCCCCATCAACACCGGACTCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCAACGCCATCTGATCCCCCACCAAATTCACCTCCACCTCCTGCAGCAGAGCCTCCTCGAACCCCTCCTCCACAGTCATCAAACCCACCTCCGCCGCCGTCGCCACCACCGCCACAAGCAAACCCCCCGGATAATCCATCGCCGCCGCCACAGCCCACAAACCCACCTGAGAATCCACCACCCACACCGCCATCTTCACCTCCATCACCAGCGTCAATACCTCCTAGAAATGCCCCTCCTCCCAGTGAGCCCCAACCTTCAAGCCCTCCTCCCAAGCCATTGCCGCCCACATCAATTGCGCCACCTCCGCCGTCACTTGTTTCTCCTCCAACATTGCCGTCAGGAAATCGCACGGACGATGGTTCTGTTCCCGATAATGGAGTAAACTCGAACTCCAACGACAATGGAGGGATTAGTACTGGGGGTGTGATTGCAATTGGTGTAGTGGCTGGAATTGTTGTGCTTTCCATAGTTGGGTTTGTTGTATGGTACATCAGGAAGCCAAGGAAAAATGATTCTGGGCGTGGGGGTTACATTATGCCATCCTCTCTGGGCTCTTCACCTAAGTCAGAAGCATCCCTTATGAAGGTCCACTCCACACTTCATCAAGACAGACAGGCCAGTGGCAGTGGTGGCAGTGGTGGCAGTGGTGGAATATACACTCCAAAAGAGCTTGGTGGGTTGGGCAATTCGAGGTCGTTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTGCTCAGAATCTTTTGGGAGAAGGTGGATTCGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAAGTTGCAGTGAAGGAGCTGAAGATTGGTGGTAGTCAGGGTGAGCAGGAATTCAAAGCTGAAGTTGAGATTATTGGTCGTGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTACTGCATTTCAGAGCATCAAAGGTTGCTAGTCTATGATTATGTTCCTAACAATTCCCTTTACTACCATCTTCATATTAAAGGGGAGGGTGAGCTGGTTCTAGACTGGGCAAAACGCATTAAGATTGCAGCTGGTGCAGCCCGGGGAATAGCGTATCTTCATGAAGACTGCCATCCTCGAATTATCCACCGAGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTTGGGCTAGCTAAACTAGCTCTCGACGCACAAACTCATATAACCACCCGTGTTGTTGGAACTTTCGGGTATGTTGCCCCTGAATATGCATCAAGTGGAAAGTTAACTGAGAGATCAGATGTATATTCTTTTGGAGTTGTGCTGCTCGAGCTGATTACTGGTAGGAAGGCTGTGGATTCATCCCAACCAATGGGGAACGAAAGCCTTGTCGAATGGGCCCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAGATTAGTGGACCCGAGGCTTGAAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGCGTGCGGCATGCCTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCCACCACAGATTTAAGCAACGGAATGAGATTCGGGGAGAGTCGAGCTTTCGACTCCGGTCAACAATCTGCCGAAATTAGATTTTTCCGAATGCTGGCATTTGGTAACCAAGATTACAGTTCAGATTTTTATAGCCAAGGTAGCTCAAATGCCTGA 2145 51.33 MAAVSPAPNSSPSPASPSSPSPPPPVASTPPPNTPSPSPPQPPSPPPQQSPPPNPSGPTTPTPSPPGPSSPPPPSRQPSATPPPPASGTPPPQTPALSPPPPRTISPATPPPTPSNAPPPSTPDSPPPSATPPVSSTPPTPSDPPPNSPPPPAAEPPRTPPPQSSNPPPPPSPPPPQANPPDNPSPPPQPTNPPENPPPTPPSSPPSPASIPPRNAPPPSEPQPSSPPPKPLPPTSIAPPPPSLVSPPTLPSGNRTDDGSVPDNGVNSNSNDNGGISTGGVIAIGVVAGIVVLSIVGFVVWYIRKPRKNDSGRGGYIMPSSLGSSPKSEASLMKVHSTLHQDRQASGSGGSGGSGGIYTPKELGGLGNSRSLFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGSQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHIKGEGELVLDWAKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDSSQPMGNESLVEWARPLLNHALDSQDFERLVDPRLERNYVESEMLKMIGIAAACVRHASAKRPQMGQVVRAFDSLATTDLSNGMRFGESRAFDSGQQSAEIRFFRMLAFGNQDYSSDFYSQGSSNA 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3370972 3375918 + Maker00026190 Lcy7g0396 637228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0396 714 MobiDBLite consensus disorder prediction 312 355 - -
Lcy7g0396 714 FunFam proline-rich receptor-like protein kinase PERK8 461 674 - -
Lcy7g0396 714 ProSiteProfiles Protein kinase domain profile. 385 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0396 714 Gene3D Transferase(Phosphotransferase) domain 1 461 676 - -
Lcy7g0396 714 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 257 691 IPR047117 -
Lcy7g0396 714 MobiDBLite consensus disorder prediction 249 274 - -
Lcy7g0396 714 Pfam Protein kinase domain 387 656 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0396 714 SMART serkin_6 385 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0396 714 MobiDBLite consensus disorder prediction 321 353 - -
Lcy7g0396 714 MobiDBLite consensus disorder prediction 1 274 - -
Lcy7g0396 714 PRINTS Proline rich extensin signature 47 72 - -
Lcy7g0396 714 PRINTS Proline rich extensin signature 6 22 - -
Lcy7g0396 714 PRINTS Proline rich extensin signature 27 44 - -
Lcy7g0396 714 MobiDBLite consensus disorder prediction 10 248 - -
Lcy7g0396 714 ProSitePatterns Protein kinases ATP-binding region signature. 391 413 IPR017441 GO:0005524(InterPro)
Lcy7g0396 714 SUPERFAMILY Protein kinase-like (PK-like) 368 658 IPR011009 -
Lcy7g0396 714 Gene3D Phosphorylase Kinase; domain 1 361 460 - -
Lcy7g0396 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0396 714 FunFam Proline-rich receptor-like protein kinase PERK8 358 460 - -
Lcy7g0396 714 CDD STKc_IRAK 391 663 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1044 Lcy-Chr10:32558569 Lcy7g0396 Lcy-Chr7:3370972 3.30E-64 dispersed
Lcy10g1047 Lcy-Chr10:32601578 Lcy7g0396 Lcy-Chr7:3370972 4.88E-57 dispersed
Lcy13g0161 Lcy-Chr13:1651314 Lcy7g0396 Lcy-Chr7:3370972 5.78E-92 dispersed
Lcy2g0548 Lcy-Chr2:4687322 Lcy7g0396 Lcy-Chr7:3370972 1.56E-63 dispersed
Lcy2g1549 Lcy-Chr2:20695316 Lcy7g0396 Lcy-Chr7:3370972 8.09E-54 dispersed
Lcy3g0415 Lcy-Chr3:13866247 Lcy7g0396 Lcy-Chr7:3370972 5.13E-65 dispersed
Lcy5g1291 Lcy-Chr5:30557563 Lcy7g0396 Lcy-Chr7:3370972 7.38E-70 dispersed
Lcy6g0610 Lcy-Chr6:5821023 Lcy7g0396 Lcy-Chr7:3370972 6.54E-73 dispersed
Lcy7g0178 Lcy-Chr7:1578282 Lcy7g0396 Lcy-Chr7:3370972 1.55E-156 dispersed
Lcy7g0396 Lcy-Chr7:3370972 Lcy8g1105 Lcy-Chr8:37163932 1.02E-118 dispersed
Lcy7g1441 Lcy-Chr7:24257963 Lcy7g0396 Lcy-Chr7:3370972 7.47E-77 dispersed
Lcy8g1110 Lcy-Chr8:37271946 Lcy7g0396 Lcy-Chr7:3370972 3.26E-40 dispersed
Lcy8g1287 Lcy-Chr8:39475950 Lcy7g0396 Lcy-Chr7:3370972 1.63E-62 dispersed
Lcy9g1937 Lcy-Chr9:44371168 Lcy7g0396 Lcy-Chr7:3370972 7.55E-61 dispersed
Lcy7g0388 Lcy-Chr7:3288478 Lcy7g0396 Lcy-Chr7:3370972 4.01E-77 proximal
Lcy12g0562 Lcy-Chr12:6852684 Lcy7g0396 Lcy-Chr7:3370972 1.80E-91 transposed
Lcy2g0241 Lcy-Chr2:1906555 Lcy7g0396 Lcy-Chr7:3370972 3.05E-84 transposed
Lcy4g0538 Lcy-Chr4:6479580 Lcy7g0396 Lcy-Chr7:3370972 9.87E-71 transposed
Lcy5g2076 Lcy-Chr5:43878112 Lcy7g0396 Lcy-Chr7:3370972 1.31E-60 transposed
Lcy6g0213 Lcy-Chr6:1940605 Lcy7g0396 Lcy-Chr7:3370972 6.82E-87 transposed
Lcy10g2106 Lcy-Chr10:45109045 Lcy7g0396 Lcy-Chr7:3370972 1.43E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66069 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0396 - - - 0.0