Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0396 | ATGGCGGCAGTATCACCGGCGCCTAATTCATCTCCGTCGCCGGCTTCTCCTTCCTCACCATCTCCGCCGCCTCCCGTCGCATCTACTCCGCCGCCCAATACTCCGTCACCGTCGCCGCCACAACCTCCTTCTCCGCCGCCGCAACAATCGCCTCCTCCGAATCCTTCTGGCCCTACAACTCCTACTCCGTCACCACCAGGTCCGTCGTCTCCTCCTCCGCCATCTCGTCAACCATCTGCTACTCCACCTCCGCCTGCTTCTGGAACTCCGCCGCCACAAACACCCGCATTGTCTCCTCCGCCGCCTCGAACCATTTCGCCGGCAACTCCACCCCCAACTCCGTCAAATGCTCCGCCCCCATCAACACCGGACTCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCAACGCCATCTGATCCCCCACCAAATTCACCTCCACCTCCTGCAGCAGAGCCTCCTCGAACCCCTCCTCCACAGTCATCAAACCCACCTCCGCCGCCGTCGCCACCACCGCCACAAGCAAACCCCCCGGATAATCCATCGCCGCCGCCACAGCCCACAAACCCACCTGAGAATCCACCACCCACACCGCCATCTTCACCTCCATCACCAGCGTCAATACCTCCTAGAAATGCCCCTCCTCCCAGTGAGCCCCAACCTTCAAGCCCTCCTCCCAAGCCATTGCCGCCCACATCAATTGCGCCACCTCCGCCGTCACTTGTTTCTCCTCCAACATTGCCGTCAGGAAATCGCACGGACGATGGTTCTGTTCCCGATAATGGAGTAAACTCGAACTCCAACGACAATGGAGGGATTAGTACTGGGGGTGTGATTGCAATTGGTGTAGTGGCTGGAATTGTTGTGCTTTCCATAGTTGGGTTTGTTGTATGGTACATCAGGAAGCCAAGGAAAAATGATTCTGGGCGTGGGGGTTACATTATGCCATCCTCTCTGGGCTCTTCACCTAAGTCAGAAGCATCCCTTATGAAGGTCCACTCCACACTTCATCAAGACAGACAGGCCAGTGGCAGTGGTGGCAGTGGTGGCAGTGGTGGAATATACACTCCAAAAGAGCTTGGTGGGTTGGGCAATTCGAGGTCGTTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTGCTCAGAATCTTTTGGGAGAAGGTGGATTCGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAAGTTGCAGTGAAGGAGCTGAAGATTGGTGGTAGTCAGGGTGAGCAGGAATTCAAAGCTGAAGTTGAGATTATTGGTCGTGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTACTGCATTTCAGAGCATCAAAGGTTGCTAGTCTATGATTATGTTCCTAACAATTCCCTTTACTACCATCTTCATATTAAAGGGGAGGGTGAGCTGGTTCTAGACTGGGCAAAACGCATTAAGATTGCAGCTGGTGCAGCCCGGGGAATAGCGTATCTTCATGAAGACTGCCATCCTCGAATTATCCACCGAGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTTGGGCTAGCTAAACTAGCTCTCGACGCACAAACTCATATAACCACCCGTGTTGTTGGAACTTTCGGGTATGTTGCCCCTGAATATGCATCAAGTGGAAAGTTAACTGAGAGATCAGATGTATATTCTTTTGGAGTTGTGCTGCTCGAGCTGATTACTGGTAGGAAGGCTGTGGATTCATCCCAACCAATGGGGAACGAAAGCCTTGTCGAATGGGCCCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAGATTAGTGGACCCGAGGCTTGAAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGCGTGCGGCATGCCTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCCACCACAGATTTAAGCAACGGAATGAGATTCGGGGAGAGTCGAGCTTTCGACTCCGGTCAACAATCTGCCGAAATTAGATTTTTCCGAATGCTGGCATTTGGTAACCAAGATTACAGTTCAGATTTTTATAGCCAAGGTAGCTCAAATGCCTGA | 2145 | 51.33 | MAAVSPAPNSSPSPASPSSPSPPPPVASTPPPNTPSPSPPQPPSPPPQQSPPPNPSGPTTPTPSPPGPSSPPPPSRQPSATPPPPASGTPPPQTPALSPPPPRTISPATPPPTPSNAPPPSTPDSPPPSATPPVSSTPPTPSDPPPNSPPPPAAEPPRTPPPQSSNPPPPPSPPPPQANPPDNPSPPPQPTNPPENPPPTPPSSPPSPASIPPRNAPPPSEPQPSSPPPKPLPPTSIAPPPPSLVSPPTLPSGNRTDDGSVPDNGVNSNSNDNGGISTGGVIAIGVVAGIVVLSIVGFVVWYIRKPRKNDSGRGGYIMPSSLGSSPKSEASLMKVHSTLHQDRQASGSGGSGGSGGIYTPKELGGLGNSRSLFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGSQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHIKGEGELVLDWAKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDSSQPMGNESLVEWARPLLNHALDSQDFERLVDPRLERNYVESEMLKMIGIAAACVRHASAKRPQMGQVVRAFDSLATTDLSNGMRFGESRAFDSGQQSAEIRFFRMLAFGNQDYSSDFYSQGSSNA | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3370972 | 3375918 | + | Maker00026190 | Lcy7g0396 | 637228 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0396 | 714 | MobiDBLite | consensus disorder prediction | 312 | 355 | - | - | |
Lcy7g0396 | 714 | FunFam | proline-rich receptor-like protein kinase PERK8 | 461 | 674 | - | - | |
Lcy7g0396 | 714 | ProSiteProfiles | Protein kinase domain profile. | 385 | 663 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0396 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 461 | 676 | - | - | |
Lcy7g0396 | 714 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 257 | 691 | IPR047117 | - | |
Lcy7g0396 | 714 | MobiDBLite | consensus disorder prediction | 249 | 274 | - | - | |
Lcy7g0396 | 714 | Pfam | Protein kinase domain | 387 | 656 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0396 | 714 | SMART | serkin_6 | 385 | 638 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0396 | 714 | MobiDBLite | consensus disorder prediction | 321 | 353 | - | - | |
Lcy7g0396 | 714 | MobiDBLite | consensus disorder prediction | 1 | 274 | - | - | |
Lcy7g0396 | 714 | PRINTS | Proline rich extensin signature | 47 | 72 | - | - | |
Lcy7g0396 | 714 | PRINTS | Proline rich extensin signature | 6 | 22 | - | - | |
Lcy7g0396 | 714 | PRINTS | Proline rich extensin signature | 27 | 44 | - | - | |
Lcy7g0396 | 714 | MobiDBLite | consensus disorder prediction | 10 | 248 | - | - | |
Lcy7g0396 | 714 | ProSitePatterns | Protein kinases ATP-binding region signature. | 391 | 413 | IPR017441 | GO:0005524(InterPro) | |
Lcy7g0396 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 368 | 658 | IPR011009 | - | |
Lcy7g0396 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 361 | 460 | - | - | |
Lcy7g0396 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 507 | 519 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy7g0396 | 714 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 358 | 460 | - | - | |
Lcy7g0396 | 714 | CDD | STKc_IRAK | 391 | 663 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1044 | Lcy-Chr10:32558569 | Lcy7g0396 | Lcy-Chr7:3370972 | 3.30E-64 | dispersed | |
Lcy10g1047 | Lcy-Chr10:32601578 | Lcy7g0396 | Lcy-Chr7:3370972 | 4.88E-57 | dispersed | |
Lcy13g0161 | Lcy-Chr13:1651314 | Lcy7g0396 | Lcy-Chr7:3370972 | 5.78E-92 | dispersed | |
Lcy2g0548 | Lcy-Chr2:4687322 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.56E-63 | dispersed | |
Lcy2g1549 | Lcy-Chr2:20695316 | Lcy7g0396 | Lcy-Chr7:3370972 | 8.09E-54 | dispersed | |
Lcy3g0415 | Lcy-Chr3:13866247 | Lcy7g0396 | Lcy-Chr7:3370972 | 5.13E-65 | dispersed | |
Lcy5g1291 | Lcy-Chr5:30557563 | Lcy7g0396 | Lcy-Chr7:3370972 | 7.38E-70 | dispersed | |
Lcy6g0610 | Lcy-Chr6:5821023 | Lcy7g0396 | Lcy-Chr7:3370972 | 6.54E-73 | dispersed | |
Lcy7g0178 | Lcy-Chr7:1578282 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.55E-156 | dispersed | |
Lcy7g0396 | Lcy-Chr7:3370972 | Lcy8g1105 | Lcy-Chr8:37163932 | 1.02E-118 | dispersed | |
Lcy7g1441 | Lcy-Chr7:24257963 | Lcy7g0396 | Lcy-Chr7:3370972 | 7.47E-77 | dispersed | |
Lcy8g1110 | Lcy-Chr8:37271946 | Lcy7g0396 | Lcy-Chr7:3370972 | 3.26E-40 | dispersed | |
Lcy8g1287 | Lcy-Chr8:39475950 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.63E-62 | dispersed | |
Lcy9g1937 | Lcy-Chr9:44371168 | Lcy7g0396 | Lcy-Chr7:3370972 | 7.55E-61 | dispersed | |
Lcy7g0388 | Lcy-Chr7:3288478 | Lcy7g0396 | Lcy-Chr7:3370972 | 4.01E-77 | proximal | |
Lcy12g0562 | Lcy-Chr12:6852684 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.80E-91 | transposed | |
Lcy2g0241 | Lcy-Chr2:1906555 | Lcy7g0396 | Lcy-Chr7:3370972 | 3.05E-84 | transposed | |
Lcy4g0538 | Lcy-Chr4:6479580 | Lcy7g0396 | Lcy-Chr7:3370972 | 9.87E-71 | transposed | |
Lcy5g2076 | Lcy-Chr5:43878112 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.31E-60 | transposed | |
Lcy6g0213 | Lcy-Chr6:1940605 | Lcy7g0396 | Lcy-Chr7:3370972 | 6.82E-87 | transposed | |
Lcy10g2106 | Lcy-Chr10:45109045 | Lcy7g0396 | Lcy-Chr7:3370972 | 1.43E-169 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66069 | None | None | None | None | Lcy | PK |
Pathway information
