Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0403 ATGCCGTCGCCTCAGATCCTTCCTATAACCCAGCCCCCTTCGTCGTCTCCATTTTCCTCCGAAGGCTCAGCGGCCAATTCTATTATGGCAACAGCATCTACTACCATAGACATAACGTTGCTTAAAGAAGACGATGAACAGAGAACTGGAGTGCTTGTTTCTCCCTTGTTCGAGGATGATAAGACGGTAGCTTATAAGCCCCTTCTTCCAAGGACTTCAAGCTATGCCTCCACCACATCCAGTTCATCCACCGGAACCATTATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGAATTTTTGCCCTTTCTCTCCGGTGACGGCCGTCACCAGACTGTTGATCGTCATGTCGAGAATGCCGATGTCGTGAGAGCTGAGAGATTTCTACTGACTCGGTTTGGTTTGAAACTCTCGAAATATATTAGGGTAGCCATCAGATGTATTGCAAGATTTCTCGCACTTGGCTGTTACTCATTGTTTCTTCTCCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGCCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGCGGGGCTTGGATTATTGGGTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAACGAGATGTCATCGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGACGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATCAGAGAATTTGGAGGCGATCCAAACAGAATTTTTCTAATGGGTCAGTCAGCTGGCGCTCATATAGCTGCTTGCACACTTTTGGAGCAAGCAATTAAAGAGGTTCGCAGAGTAGAAAGTATCTCATGGAGTGTGTCCCAGATTAAAGCTTACTTTGGTTTGTCAGGAGGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCCTGGAAGAACCTAACATGGGAGCTGTCGTCTCGATTCTTCCTCCCATCATTTTATTTCATGGAACCGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGACTCTTCAAAGTGTTGGAGTGAAAGCCGAGACATTTTTCTACGAAGGAAAGACACATACAGATGTATTCGTTCAGGATCCACTAAGGGGTGGCAGAGATCAGATGTTTGAAGATCTTGTCGCGATCATCCATGCCAATGATGCAGATGCGCAGGCGAGAGATGCAGTGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCTTTCTAA 1374 44.54 MPSPQILPITQPPSSSPFSSEGSAANSIMATASTTIDITLLKEDDEQRTGVLVSPLFEDDKTVAYKPLLPRTSSYASTTSSSSTGTIMYKQKRRRVKSEEFLPFLSGDGRHQTVDRHVENADVVRAERFLLTRFGLKLSKYIRVAIRCIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIFLMGQSAGAHIAACTLLEQAIKEVRRVESISWSVSQIKAYFGLSGGIMEGEQSLKRFSPEVMILEEPNMGAVVSILPPIILFHGTADYSIPSDASKTFAETLQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDADAQARDAVAPPRRRLVPEFMLMLARSVSPF 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3443914 3447918 + Maker00025888 Lcy7g0403 637235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0403 457 Pfam BD-FAE 193 381 IPR049492 -
Lcy7g0403 457 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 96 423 IPR050300 GO:0016298(PANTHER)
Lcy7g0403 457 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Lcy7g0403 457 Gene3D alpha/beta hydrolase 173 406 IPR029058 -
Lcy7g0403 457 SUPERFAMILY alpha/beta-Hydrolases 175 400 IPR029058 -
Lcy7g0403 457 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0168 Lcy-Chr12:2078603 Lcy7g0403 Lcy-Chr7:3443914 9.15E-145 transposed
Lcy10g0840 Lcy-Chr10:25828844 Lcy7g0403 Lcy-Chr7:3443914 3.09E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0403 K15889 - csv:101206426 797.349