Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0409 | ATGGCCGCAGCATTGTCCTCACTGGCTCCGTTACTCATCTTTGCCAGGATTTTTGGTCTGCTTGTTGCCGTTCTGGTCTTCGTTTGGGCTCTTGCTTTCAGTTCTAGCTTCGGCCATCTCCCCCCCTCCCGGGATGACCGTATCTTCGACGTTCTGCATCCTTTGTTCATGGTAATTGGTCTCGTTCTACTCAGCGGAGAAGCAATTTTGGTCCATAGTTGGTTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATTTGATTCTTCAAGGGCTGGCTTTGACTTCTGGGATTTTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCATAGTATACATTCTTGGATGGGTTTGATCGTTGTCACTTTGTTCGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCATTGGAGGGAGGTTAGAGCCACAAGAGAAAGAGTGCTGCCATGGCATGTGTTCCTTGGTTTATACAGCTATGCATTGGCAGTGGCAACAGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGTTGCAAACAAAGAGAAATGTTCCTAGGAAGGGCCCTGAAGCCATGGTTGTCAACAGTCTTGGTTTGGCCATGGCTTTGCTTAGTGGAATTGTGGTGCTTACTGCTATATCTCCCAAATATCCTCCTTCCCTTCCTACCACTAAACAGCCATTTTCCTCTAATTCAAAACCCATGTCTTCTTGA | 732 | 46.31 | MAAALSSLAPLLIFARIFGLLVAVLVFVWALAFSSSFGHLPPSRDDRIFDVLHPLFMVIGLVLLSGEAILVHSWLPGSRNLRKSVHLILQGLALTSGIFGIWTKFHWDRGFLANFHSIHSWMGLIVVTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVATAETGLLEKLTLLQTKRNVPRKGPEAMVVNSLGLAMALLSGIVVLTAISPKYPPSLPTTKQPFSSNSKPMSS | 243 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3512643 | 3514678 | + | Maker00026141 | Lcy7g0409 | 637241 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0409 | 243 | FunFam | Cytochrome b reductase 1 | 4 | 226 | - | - | |
| Lcy7g0409 | 243 | PANTHER | CYTOCHROME B561-RELATED | 3 | 223 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Lcy7g0409 | 243 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Lcy7g0409 | 243 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - | |
| Lcy7g0409 | 243 | Gene3D | - | 1 | 224 | - | - | |
| Lcy7g0409 | 243 | Pfam | Eukaryotic cytochrome b561 | 52 | 182 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy12g0015 | Lcy-Chr12:463161 | Lcy7g0409 | Lcy-Chr7:3512643 | 9.09E-38 | dispersed | |
| Lcy10g2110 | Lcy-Chr10:45159516 | Lcy7g0409 | Lcy-Chr7:3512643 | 2.66E-62 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy7g0409 | K08360 | - | csv:101205948 | 427.557 |