Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0468 ATGAGAATGAGTTGCAATGGTTGTCGAATCCTTCGCAAAGGTTGCAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCGCCCGATGCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTCTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCCAACACCTCCGCCCTGCAATTTTTAAGTCGTTGCTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTGTATGGTTCCGTCGGCTTGCTCTGCTCCGGCGACTGGGAGAGGTGTCAGGCCGCCGTCGACGCTGTGTTGAACGGATCCATGAACGTCGAACCCGACGCGCCGCCGTCAAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTCTGTAACGACACCAATTTGGCTGTTTCCGGCGAGCTTCTCAAGGTCAAGCCTCGGAGCCGGTTCAAGAAGCCCGAAAACCGGACCAAACCCAAACCCGGGCCGGCTCATGAATTGGGGAGTGGGTCTAATGCGGACGAGTCCGACGCGAACCGCCGAGTGGAGGATTTAATGATGAACCAGTGGAACCCGGGTCGGGTTGTGAGAAATGGAAGCCGGTTTGAGGAGGAGGATGTTGAGCTGGAACTGACTCTTAATTCGGCTCAGTAA 660 55.91 MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNANLSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDANRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4153870 4155561 - Maker00009658 Lcy7g0468 637300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0468 219 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Lcy7g0468 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 215 - GO:0010468(PANTHER)
Lcy7g0468 219 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lcy7g0468 219 MobiDBLite consensus disorder prediction 148 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0154 Lcy-Chr12:1893317 Lcy7g0468 Lcy-Chr7:4153870 1.10E-63 dispersed
Lcy1g0925 Lcy-Chr1:8066962 Lcy7g0468 Lcy-Chr7:4153870 2.77E-46 dispersed
Lcy7g0468 Lcy-Chr7:4153870 Lcy9g2044 Lcy-Chr9:45312270 6.34E-46 dispersed
Lcy2g0439 Lcy-Chr2:3668471 Lcy7g0468 Lcy-Chr7:4153870 3.55E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20393 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0468 - - - 0.0