Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0563 | ATGGGGGTCCCTGCAACTTTGGGCGACGATTTTCTGAGAGAACGAGCGGCGAAGATGAGAGAATCACTGCAAAAGAGCCAAACCATTACGGATAACGTCGTCTCGATTCTCGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGTCCTACCCAGATCAGAACCAATTCTATTCGTAAAGCTCATGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGTTGGTCTTCTTGATACTTGGAGTTTAGTGCGCCTGGATGAGACCTTTTCCACTAGGGTTATGCAGGCTGACCACCCTTTATCCCATTTCCTTGTGGTTGTTGACGTCCTTAGCAAGGATGGGCCGTTTATTAATCTTAATAAAACCGTGTATGGTTTTGCGATTATCTTCAATTTTAAGATCAATAGGGATAAGGGTTCTGTGATTGGTACTAAAGAGTACTCTTCCTACTATCTACCTTGGTCTTCCCATGGGACAGTGAATCAAGTGACGTGTGCACAGGCAGAAACAAAAATACTTAAAGGGCCACATGAGGATTTGGAGAGTTATCTCGGGGCAATTGGTCAATTAAGAAACATTATTAAATTCTTTAGCAGCCATAAAAGTTTTAAGAGTAGTGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATTTCAAAGCTAGAAGATGAGTTCAGACAACTGTTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTTGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCAACATGATGATTCAGGTGGAAAGAATCCTTCCTCAAATCATCATGCTGCACATCCTGATAATAATTTGGAGACTGCTGTCTACACACCTCCCACTCTAATACCACCACGTGTCCTACCACTGCTGCATGATTTATCACTGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTTTAAAAATCTACAGGGACACCCGTTCAGTCGTTTTGGAAGAAAGCCTACGAAAATTAGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCGTGGGAGGTTTTAGAGGCAAAAATCGGGAACTGGATTCATTTTATGCGTATTGCAGTCAAACTGCTGTTTGCTGGAGAACGAAAAGTGTGTGATCAAATATTTGAAGGCTTTGAATCGCTTAGAGATCAATCCTTTGCAGAGGTTACAAGTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCGCCAGAGAAGTTGTTTGTACTTTTGGATATGTATGAAATAATGCGAGAGCTTCACTCAGAGGTATGTCTAATGCTTTTACAAGGCGTTAACCACCAAAACCATTTAGCTAGAGTCCTCTTTGGTGATTGCAAAATGAAGAGTTTTTGTGACTCAATAACTGGCTCCTTTCCTGTGAGCTCAGAACCTTCCCTTTTCACTTTACCTGCATCAGGACAATTGGCTTGGAAAGACTTGCTGTCAGTAATTGAGACGATTTTTAAGGGTAAAGCATGCAACGAGATCAGAGAATCTGCATCAGGTTTGACCAAACGGCTTGCTCAGACAGCCAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCAACAAAAACTGCAGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTCGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGATAGTGGTCAAACAAGTTCGGAATTGGCCACTGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGACGGGAAATCTATGCATTACAAAGATCCTTCTTTGACTCACTTATTCCTCATGAACAACATTCATTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTAGGGGACGATTGGGTTCAGAGACATAGGAGGATTGTACAACAACATGCAAATCAGTATAAAAGGAAGGCTTGGGCAAAGATTCTGCAATGTCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGTGTACCCGGTATAGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCACTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCTGATACTGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTCGGGCCACTAGTTGATGGTGGAAAGAATCCCCAAAAGTATGTCAGATACCAACCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTCGAGGGGAAGAACTTGAGTGAACCCAAGCGCTAG | 2427 | 42.36 | MGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQVGLLDTWSLVRLDETFSTRVMQADHPLSHFLVVVDVLSKDGPFINLNKTVYGFAIIFNFKINRDKGSVIGTKEYSSYYLPWSSHGTVNQVTCAQAETKILKGPHEDLESYLGAIGQLRNIIKFFSSHKSFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGQHDDSGGKNPSSNHHAAHPDNNLETAVYTPPTLIPPRVLPLLHDLSLQMVQAGHQQQILKIYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEVCLMLLQGVNHQNHLARVLFGDCKMKSFCDSITGSFPVSSEPSLFTLPASGQLAWKDLLSVIETIFKGKACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTSSELATVTMQIMQALQSNLDGKSMHYKDPSLTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRKAWAKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR | 808 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4949704 | 4959786 | + | Maker00009903 | Lcy7g0563 | 637395 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0563 | 808 | Gene3D | Exocyst complex component Exo70 | 176 | 808 | - | - | |
Lcy7g0563 | 808 | SUPERFAMILY | Cullin repeat-like | 179 | 799 | IPR016159 | - | |
Lcy7g0563 | 808 | MobiDBLite | consensus disorder prediction | 265 | 293 | - | - | |
Lcy7g0563 | 808 | MobiDBLite | consensus disorder prediction | 263 | 301 | - | - | |
Lcy7g0563 | 808 | Pfam | Exo70 exocyst complex subunit C-terminal | 375 | 456 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Lcy7g0563 | 808 | Pfam | Exo70 exocyst complex subunit C-terminal | 510 | 795 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Lcy7g0563 | 808 | Coils | Coil | 224 | 244 | - | - | |
Lcy7g0563 | 808 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 19 | 801 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Lcy7g0563 | 808 | Pfam | Exocyst complex component Exo70 N-terminal | 180 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g1210 | Lcy-Chr1:11440877 | Lcy7g0563 | Lcy-Chr7:4949704 | 2.60E-292 | dispersed | |
Lcy7g0563 | Lcy-Chr7:4949704 | Lcy8g1841 | Lcy-Chr8:44721348 | 1.72E-70 | dispersed | |
Lcy7g0563 | Lcy-Chr7:4949704 | Lcy2g0063 | Lcy-Chr2:462483 | 4.71E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy7g0563 | K07195 | - | csv:101206262 | 934.095 |