Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0583 ATGTTAAAGGAAAGAAGTGAAAATGAACGATTGATTGGAGAAATTTCGATGTTAAACTGCGTTTTCGAAATGCTTGCTCCCAATGTGGTCCAAGATTTGAGCTTTGAGAACTTCGGCACTTTTCGTGGACTCGATGGAGCAGTCGAGAAGATTGGAGAAGGAACTTATGGTGTGGTTTACAAGGCAAGAGACCGTGTTACAAATGAGACTATTGCTTTGAAGAAGATCCGCTTGGAGCAGGAAGATGAGGGAGTGCCAAGCACGGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTACAAGATGTAGTGCATAGCGAGAAGCGCCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCACATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGTCATTCTCATAGAGTTCTTCATCGAGATCTAAAACCCCAAAATCTACTGATAGATCGTCGTACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACGCTTTGGTATAGAGCACCAGAAATATTACTTGGTTCCCGACACTATTCCACCCCCGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAAATGGTTAACCAGCGGCCATTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCCGGTGTTACATCTTTGCCTGATTTTAAGTCCGCTTTCCCCAAGTGGCCTTCCAAGCTTGACTTTACACATGCTCTACTCGCACAGGACCTGGCTTCTGTAGTTCCAAATCTTGAATCGGCTGGCATTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCCCTTGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA 1038 43.83 MLKERSENERLIGEISMLNCVFEMLAPNVVQDLSFENFGTFRGLDGAVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKLDFTHALLAQDLASVVPNLESAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5163007 5168340 - Maker00009636 Lcy7g0583 637415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0583 345 Gene3D Phosphorylase Kinase; domain 1 46 125 - -
Lcy7g0583 345 PANTHER CELL DIVISION PROTEIN KINASE 48 338 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)|GO:0051445(PANTHER)
Lcy7g0583 345 Gene3D Transferase(Phosphotransferase) domain 1 127 343 - -
Lcy7g0583 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0583 345 SUPERFAMILY Protein kinase-like (PK-like) 48 341 IPR011009 -
Lcy7g0583 345 CDD STKc_CDK1_CdkB_like 48 338 - -
Lcy7g0583 345 ProSiteProfiles Protein kinase domain profile. 45 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0583 345 SMART serkin_6 45 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0583 345 FunFam Cell division control protein 2 45 125 - -
Lcy7g0583 345 FunFam Cell division control protein 2 homolog 127 343 - -
Lcy7g0583 345 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524(InterPro)
Lcy7g0583 345 Pfam Protein kinase domain 48 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0922 Lcy-Chr1:8043908 Lcy7g0583 Lcy-Chr7:5163007 4.63E-37 dispersed
Lcy2g0403 Lcy-Chr2:3377461 Lcy7g0583 Lcy-Chr7:5163007 1.51E-79 dispersed
Lcy6g2275 Lcy-Chr6:47438428 Lcy7g0583 Lcy-Chr7:5163007 7.37E-61 dispersed
Lcy7g0583 Lcy-Chr7:5163007 Lcy9g2355 Lcy-Chr9:47833661 2.83E-101 dispersed
Lcy7g0583 Lcy-Chr7:5163007 Lcy13g1705 Lcy-Chr13:36024367 1.26E-87 transposed
Lcy7g0583 Lcy-Chr7:5163007 Lcy7g0070 Lcy-Chr7:687724 5.82E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66075 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0583 K02206 - csv:116405161 565.844