Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0590 | ATGCTTCTCTCTCTTTTTATACCAACTCTTTTTTTTCTCTCTCACCCAATTCCCCAAATCTCAATGGCTTCTTTCTTCCTCATTGCCTTTTTCCTCTCTGGTTTAATCTTCTTCCTCACCAGAAAACCCAAAAAAACCCGCCCCAAACTCCCCCCTGGACCGCCCGGTTGGCCCCTCGTCGGCAACCTCTTCCAAGTCGCCCGGTCCAAGAAACCCTTCTTCGAGTACATCGAAGATCAACGCCAAATCTACGGCCCGATTTTTTCCCTCAAAATGGGCACCAGAACGATGATTGTACTGAGCGATTCGAATCTCGTTCACGAATCTCTGATTAAAAAGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGACTATTTTCAGCAGCAACAAATTTTCCGTCAATGCGGCGGTTTACGGCCCTGTATGGAGGTCCCTCCGCCGCAACATGGTGGAGAACATGCTCAGCTCCGGCAAGGTGAAGGAGTTTCGCGGCGTCAGAGAAAAGGCGATGGAAAAATTCGTGAAACGGTTGCACGACGAGGCCGAGGGCGAAAACGGCGTCGTTTGGGTTTTGAAAAACGCGCGTTTCGCGGTGTTTTGGATCATGTTGACGATGTGTTTCGGATTCGAAATGGAAGAAGAAACGGTCGTGGAAATGGACGAGATTCTCAAATCCGTTCTGATCACGCTCGATCCGAGAATCGACGATTATCTGCCGATTCTGACGCCGTTTTTTTCGAGAGAGAGAGAGCAGGCGATGAGAGTTCGAAAGCGACAAGTGGAATTCGTCGTTGGGCTGATTAATCGGCGGCGGCGGGCGTTGGAGAATCCGGCGTCCGACGGCGCTGCGACGTCGTTTTCGTATCTGGATACGCTTCTCGATTTGAAATTGGAGGGCGGCGGAGGGAGGAGGAGGAGGACGGCGGACGAGGAATTGGTGACGCTCTGTTCGGAGTTTTTGAACGGCGGAACGGACACGACGGCGACGGCGATAGAGTGGGGGATGGCGGAGTTGATAGCGAATCCGGAAGTTCAGAGGAAGGTTGTGGAAGAGATAAAAGCGACGGTTGGTGAAAAGAAAGTGGACGAGAAAGATGTGGAGAAAATGCCTTATTTAAAAGCGGTTGTGAAAGAAGTGCTTCGGAAACATCCTCCGACGTTCTTTGCTTTGACGCACTCCGTGACGGAGCCGGCGAAATTGGCAGGATACGATATCCCAAAAGACACGAGCGTGGAATTCTTCTTACCCGCCATTGGAGGGGATCCGAAGCTGTGGAAGAATCCAGAGAAGTTCGAACCGGAAAGATTTTACTCCGGCGAGGAAGAAGCCGACATAACCGGCATCACCGGTGTCAGAATGATGCCGTTCGGCGTCGGGCGGCGGATCTGCCCGGGTCTGGGAATGGCCACCGTCCACATTCATTTAATGCTTGCCAGAATGCTGCAGGAATTCGAATGGACCGCCTTTCCGCCGCGGAGCTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTAGGGCTGTCATCAAAACTAGGGTTTGA | 1572 | 52.04 | MLLSLFIPTLFFLSHPIPQISMASFFLIAFFLSGLIFFLTRKPKKTRPKLPPGPPGWPLVGNLFQVARSKKPFFEYIEDQRQIYGPIFSLKMGTRTMIVLSDSNLVHESLIKKGAVFADRPRENPTRTIFSSNKFSVNAAVYGPVWRSLRRNMVENMLSSGKVKEFRGVREKAMEKFVKRLHDEAEGENGVVWVLKNARFAVFWIMLTMCFGFEMEEETVVEMDEILKSVLITLDPRIDDYLPILTPFFSREREQAMRVRKRQVEFVVGLINRRRRALENPASDGAATSFSYLDTLLDLKLEGGGGRRRRTADEELVTLCSEFLNGGTDTTATAIEWGMAELIANPEVQRKVVEEIKATVGEKKVDEKDVEKMPYLKAVVKEVLRKHPPTFFALTHSVTEPAKLAGYDIPKDTSVEFFLPAIGGDPKLWKNPEKFEPERFYSGEEEADITGITGVRMMPFGVGRRICPGLGMATVHIHLMLARMLQEFEWTAFPPRSSVDFSWKMEFTVVMKNPLRAVIKTRV | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 5283200 | 5286491 | - | Maker00009935 | Lcy7g0590 | 637422 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0590 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 105 | 126 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 418 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 81 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | SUPERFAMILY | Cytochrome P450 | 51 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | CDD | CYP77_89 | 83 | 516 | - | - | |
| Lcy7g0590 | 523 | Gene3D | Cytochrome P450 | 43 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | Pfam | Cytochrome P450 | 51 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | FunFam | Cytochrome P450 family protein | 44 | 523 | - | - | |
| Lcy7g0590 | 523 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0590 | 523 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 32 | 521 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy1g0433 | Lcy-Chr1:3831887 | Lcy7g0590 | Lcy-Chr7:5283200 | 1.39E-141 | dispersed | |
| Lcy7g0590 | Lcy-Chr7:5283200 | Lcy8g0971 | Lcy-Chr8:34286358 | 4.01E-120 | dispersed | |
| Lcy10g1694 | Lcy-Chr10:41339040 | Lcy7g0590 | Lcy-Chr7:5283200 | 6.40E-252 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy7g0590 | K21995 | - | csv:101217068 | 788.875 |