Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g0605 | ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAGGGCAACGCTTCTAATGGCGGCAATGTTCAGAGATCCAAGAGCTTTGCGTTTCGAGCTCCTCAGGAGAATTTTACCATCCAGGATTTTGAATTGGGAAAGATATATGGCGTTGGCTCGTATTCGAAGGTTGTGAGGGCGAAGAAGAAGGACACAGGAATGGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAATTGGATCATCCTGATATGGCATTGGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAGATAACTAGGAAAGGTCGTCTGTCAGAGGACGAAGCTCGGTTTTATGCTGCAGAAGTGGTCGATGCTCTTGAATACATACACAACATGGGATTGATACACCGAGATATCAAGCCTGAGAACTTGCTGCTTACTACTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTGGATAGTCGAATTACCGTGCTTCCAAATGCAGCGTCAGATGATAAAGCTTGTACATTTGTTGGCACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCCTCCCCTGCAACTTTTGGAAATGACCTTTGGGCGCTTGGGTGCACTGTGTACCAGATGCTTTCAGGGACTTCTCCTTTCAAGGATGCTAGTGAGTGGCTTATTTTCCAAAAAATTGTAGCGCGAGATATAAAATTCCCCAGCTATTTTTCAGAGCAAGCCAGGGATCTCATCGACCACCTATTGGATTTAGATCCCGGCAAGAGACCAGGTGCTGGAGCTGAGGGTTATGCTTCTCTCAAGAGTCATCCCTTCTTTGAGGGGGTTGATTGGAAGAACATAAGAGCACAAACCCCTCCTAGGCTTGCTTTAGAAGCAGTGCCCCATTCAAATGAGAACGAGGATGGCTCCGAGTCCTCTTGGAATCCTTCACATATCGGAGATGGTGCACCGAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCCGAAGGATCACATCATATTACTCGGCTCGCATCGATAGACTCCTTCGATTCAAAATGGCAACAATTCCTTGAACCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAGAAACTTCAGAAACTAACAAGCAAAAAGGTTCAGCTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAATATCATTTGGTCTGACAATCCTAATGACCTCAACATTCAAGTGATTAGTCCTTCACACTTCAAGATTTGCACATTCATTCTTCAGCCAAAAAAGATTGCCTCTTTCGAGGATGCAAAACAGCGAGCCTGGCAATGGAAGAAGGCGATCGAGGGGCTTCAGAATCGGTGA | 1437 | 43.7 | MLAMEKDFDAKLMIQGNASNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGMVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPDMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNMGLIHRDIKPENLLLTTDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTVYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPGKRPGAGAEGYASLKSHPFFEGVDWKNIRAQTPPRLALEAVPHSNENEDGSESSWNPSHIGDGAPRQNDGNAGSASTSEGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVISPSHFKICTFILQPKKIASFEDAKQRAWQWKKAIEGLQNR | 478 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5456184 | 5462069 | - | Maker00009863 | Lcy7g0605 | 637437 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g0605 | 478 | Gene3D | Transferase(Phosphotransferase) domain 1 | 113 | 308 | - | - | |
Lcy7g0605 | 478 | ProSiteProfiles | Protein kinase domain profile. | 44 | 296 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0605 | 478 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 29 | 319 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Lcy7g0605 | 478 | Pfam | Protein kinase domain | 45 | 296 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0605 | 478 | Gene3D | - | 343 | 478 | IPR011993 | - | |
Lcy7g0605 | 478 | MobiDBLite | consensus disorder prediction | 318 | 357 | - | - | |
Lcy7g0605 | 478 | FunFam | 3-phosphoinositide-dependent protein kinase 2-like | 113 | 311 | - | - | |
Lcy7g0605 | 478 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 148 | 160 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy7g0605 | 478 | Pfam | PH domain | 371 | 477 | IPR033931 | - | |
Lcy7g0605 | 478 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 344 | IPR011009 | - | |
Lcy7g0605 | 478 | Coils | Coil | 458 | 478 | - | - | |
Lcy7g0605 | 478 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 112 | - | - | |
Lcy7g0605 | 478 | SMART | serkin_6 | 44 | 296 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy7g0605 | 478 | CDD | STKc_PDK1 | 42 | 296 | IPR039046 | GO:0004674(InterPro) | |
Lcy7g0605 | 478 | FunFam | 3-phosphoinositide-dependent protein kinase 1 | 344 | 478 | - | - | |
Lcy7g0605 | 478 | MobiDBLite | consensus disorder prediction | 323 | 337 | - | - | |
Lcy7g0605 | 478 | SUPERFAMILY | PH domain-like | 290 | 477 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0846 | Lcy-Chr2:7639306 | Lcy7g0605 | Lcy-Chr7:5456184 | 5.12E-31 | dispersed | |
Lcy7g0605 | Lcy-Chr7:5456184 | Lcy8g1859 | Lcy-Chr8:44891114 | 3.00E-47 | dispersed | |
Lcy7g0605 | Lcy-Chr7:5456184 | Lcy4g0413 | Lcy-Chr4:5030181 | 6.99E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66076 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy7g0605 | K06276 | - | csv:101212874 | 892.108 |