Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0623 ATGGAGGTCTCTGCAACTCAATTCAACATGAAGACCTTCACTCTCAAGCTCCTCAAGGGGTCCTGGTTCATGATGTTCGCCTCCTTCCTCATCATGTCCATGGCCGGAATCCCTTACATGTTCGGCCTCTACTCCTCCACCATCAAATCCGTCCTCGGCTACGACCAGACCACGCTCAACTTCATCAGCTTCTTCAAGGACGTCGGCACCACCGTCGGCATCCTCGCCGGCCTCATCAACGAGGTCACGCCGCCGTGGTCCATCTTGGCCATGGGCGCCGTCTTGAACTTCTTCGGCTACTTCATGATCTGGCTCTCCGTCACCGAGAAAATCCCCACGCACGTGTGGCTCATGTGCCTCTACATCTGCGTCGGCGCCAACGCCACCACGTTCGCCAACACCGGCGCCTTGGTCACGTGCGTCAAGAACTACCCGCAGCGGCGGGGCGTCGTAATCGGAATTCTGAAGGGGTACATGGGGTTGAGCGGCGCCATCGTCACGCAGCTGTACCATGCGATTTACGGGAACGATGAGAAGTCGCTGATTCTGCTGCTGGGGTGGCTGCCGGCGGTGATCTCGTATTTGTTTCTGCCGACGGTGAGGCGGATGAGGGTGGAGCACGAGGCGGATGAGCTCAGGGTTTTCTATAGGTTTCTGTATATTTCTTTGGGCTTGGCTGGGTTTCTTATGATGATGATTATTCTGCAGCAGAAGTTTAGTTTTAGCCGTGGGGAGTACGGAGGAAGTGCGGCGGTCGTTACTTTCTTGTTGCTTTTGCCCGTGGCGGTCGTCGTCGCGCAGGAGTTTAAGGCGTGGCGGCGCTTGAATAAGCCGGTGGCGCTCGAGAATGGCGGTTCGGCCATGGGCTCACCACCATTGAAGAACACAACCCCAATGTCACTCCTCCCAAAGAAACCAAAACAAGAAGAAGAGGTCAAGACCCCACCAAAAGTCCAATGGTGGAAGAACGTGTTCAACCCTCCCCAACGAGGCGACGACTGGACCATCCTCCAAGCCCTCTTCAGCTTCGACATGTTCCTCCTCTTCCTCGCGACGGCCTGCGGCGTCGGCGGCACCCTTACCGCCATCGACAACCTCGGCCAGATCGGCGGCTCCCTCCACTACCCCAAGAAAAGCATCAGCACCTTCGTCTCCCTCGTCAGCATCTGGAACTACCTCGGCCGGGTCATGGCCGGCTTCCTCTCCGAACACTTGCTCATCAAATACAAATTCCCCCGTCCCCTCATGCTCACCATCGTCCTCCTCCTCTCCTGCGTCGCCCACCTCCTCATCGCCTTCGACCCCTCCGGCGGCCTCTACATCGCCTCCGTCCTCACCGGCTTCTGCTACGGCGCCCAGTGGCCGCTGCTCTTCGCCATCGTCTCCGAGATCTTCGGCCTCAAGTACTACGCCACGCTCTACAACTTCGGCTCCGTCGCCAGCCCGGTGGGGCTCTACGTGCTCAACGTCAATGTGGCCGGGTATTTGTACGACAAGGAGGCCAAGAAGCAGCTGGCGGCGGCGGGGAGGATAAGGAAGATAGGGGAGGAGCTCAACTGTGATGGGGTTGCGTGTTTCAAGACGTCGTTTTTGATTATCACGGCGGTGACTGTGTTTGGGACTTTGGTGTCGTTGGCTTTGGTGTGGAGGACCAGGAAGTTTTATAGGAGTGATATTTATAGGAGGTATAGAGAGGCCGAGGAGGCGGCGGCGGTGGCGGCGGCGGAGGAGGGGGAGGAGGACGGTGGTGGTGGGGTGAGGAATGGTGGGGTTTTGGTGGAGGAGTCGAAGAATGGGATTAAGCAATGA 1809 57.88 MEVSATQFNMKTFTLKLLKGSWFMMFASFLIMSMAGIPYMFGLYSSTIKSVLGYDQTTLNFISFFKDVGTTVGILAGLINEVTPPWSILAMGAVLNFFGYFMIWLSVTEKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGNDEKSLILLLGWLPAVISYLFLPTVRRMRVEHEADELRVFYRFLYISLGLAGFLMMMIILQQKFSFSRGEYGGSAAVVTFLLLLPVAVVVAQEFKAWRRLNKPVALENGGSAMGSPPLKNTTPMSLLPKKPKQEEEVKTPPKVQWWKNVFNPPQRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGGSLHYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCVAHLLIAFDPSGGLYIASVLTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLAAAGRIRKIGEELNCDGVACFKTSFLIITAVTVFGTLVSLALVWRTRKFYRSDIYRRYREAEEAAAVAAAEEGEEDGGGGVRNGGVLVEESKNGIKQ 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5689805 5693260 - Maker00010005 Lcy7g0623 637455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0623 602 CDD MFS_Mch1p_like 22 541 - -
Lcy7g0623 602 MobiDBLite consensus disorder prediction 286 313 - -
Lcy7g0623 602 SUPERFAMILY MFS general substrate transporter 22 554 IPR036259 -
Lcy7g0623 602 Pfam Major Facilitator Superfamily 346 553 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy7g0623 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 563 - GO:0016020(PANTHER)
Lcy7g0623 602 Gene3D MFS general substrate transporter like domains 287 581 IPR036259 -
Lcy7g0623 602 Pfam Nodulin-like 22 265 IPR010658 -
Lcy7g0623 602 MobiDBLite consensus disorder prediction 574 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0623 Lcy-Chr7:5689805 Lcy7g0626 Lcy-Chr7:5718486 3.16E-255 dispersed
Lcy7g0623 Lcy-Chr7:5689805 Lcy7g0624 Lcy-Chr7:5703037 2.38E-249 tandem
Lcy10g1727 Lcy-Chr10:41647606 Lcy7g0623 Lcy-Chr7:5689805 2.24E-268 wgd
Lcy5g0317 Lcy-Chr5:3031968 Lcy7g0623 Lcy-Chr7:5689805 7.98E-233 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0623 - - - 0.0