Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0624 ATGATCGCCGCCGGTCCGGGAGGCGGAGGAGGAATCTCCAGATGCTCCGACATAAGAACCATTGCCGTCCACGTCATCACCGGGAGGTGGTTCGTGGTGTTCGCTTCACTTGTAATCATGGCGGCCAACGGCGGGCTCTTCATGTTCGGCCTGTATTCCAACGATATAAAGTCCGTTTTGGGGTACGATCAAACCACGTTGAATTTGTTGAGCTTTTTCAAGGATTTGGGTGCAAACGTCGGCGTTTTGTCCGGTCTTATCAACGAAGTTTCGCCGCCGTGGGTGGTTCTGTCCAGCGGCGCCGCCCTGAATTTCTTTGGTTACTTCATGATTTGGCTGGCCGTTACTAAGAGGATCTCGACGCCCAAAGTTTGGCAAATGTGTGTATACATTTGTATTGGAGGTAATTCTCAGTCGTTTGCTAACACCGGTTCGCTTGTTACTTGCGTCAAGAACTTCCCCGAGAGTCGGGGTGTCGTTATCGGTATCTTAAAGGGCTACTTCGGCCTAAGCAGCGCCATAATCACACAACTCTTCCACGCCTTCTACGGCTCCGACACCAAATCCTTAATCCTCCTCCTCGGATGGCTCCCGGCGGCCATATCCTTCGCATTTCTCCGAACAATTCGGATCATGAAAGTCATCCGACACCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCTCTCGCTCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAAGTAGTGTTAACTCAAGGCGAATACGGCGGCAGTGCCACCGTCGTCCTCCTCCTCCTCTTCCTCCCCCTCGCCGTCGTCGTAATCGAAGAATACAACCTCTGGAAACTCAAAACCGCCGCCATTGGAGCTCCAAATCCAGTCCAGATCATAACAGAGAAGCCAAACATCCCAAAAACAGAGCATCAGAAACAAACCCAACAAAAACAAAAACAAAAGCAACCATCTTGCTGGACGACGATCTTCAGCCCACCGGAACGCGGCGAGGATTTCACGATTCTCCAAGCTCTCTTCAGCATGGACATGTTGGTTCTCTTCTTCTCTGCAACCTGCGGCGTCGGCGGCACGTTGACGGTGATCGACAATCTGGGTCAAATCGGAATGTCATTGGGATATCCAAAAAGGAGCATCAGCACATTTGTGACACTCGTGAGCATTTGGAATTACCTCGGCCGAGTCGCCTCTGGTTTCATCTCTGAAATTGTTCTAACCAAATACAAATTCCCTCGTCCTTTGATGCTTTCTTTGATGCTCCTTTTCTCTTGCGCCGGTTATTTGATGATCGCTTTCGATGTCCCAAATGGGCTCTACGCAGCTTCGATCGTGATCGGATTCTGCTTCGGCGCGCAGTGGCCGTTGATTTACGCTATAATTTCGGAGCTTTTCGGGTTGAAGTATTACTCCACGCTTTTCAATTTCGGGTCAGTGGCGAGCCCGATTGGGCTTTATGTTCTTAACGTGAAAGTGACGGGTAATTTCTACGACAGAGAGGCCGAGAAGCAGCTGAGAGCAAAAGGGCTTGTGAGAAAAGCAGGGGAAGAGCTGAAGTGCTTTGGAGCAGAGTGCTTTAAGCTGTCCTTTATTGTTATTACGGGAGTTACTTTGTTGGGTATGCTCGTTTCGTTGATTTTAGTGATCAGAACGAGGAGTTTTTACAAGAGTGATATTTACAAGAAGTTCAGAGAGGAAGCTGAAGCAGAGGTGGCCGGAAATGGCGCGGTGGTGGCCGCCGGAGCGCCGGAGGAGACGAGAAAGCAATAG 1779 49.69 MIAAGPGGGGGISRCSDIRTIAVHVITGRWFVVFASLVIMAANGGLFMFGLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVSPPWVVLSSGAALNFFGYFMIWLAVTKRISTPKVWQMCVYICIGGNSQSFANTGSLVTCVKNFPESRGVVIGILKGYFGLSSAIITQLFHAFYGSDTKSLILLLGWLPAAISFAFLRTIRIMKVIRHPNELKVFYNFLYISLALAGFLMLMIIIESKVVLTQGEYGGSATVVLLLLFLPLAVVVIEEYNLWKLKTAAIGAPNPVQIITEKPNIPKTEHQKQTQQKQKQKQPSCWTTIFSPPERGEDFTILQALFSMDMLVLFFSATCGVGGTLTVIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLMLLFSCAGYLMIAFDVPNGLYAASIVIGFCFGAQWPLIYAIISELFGLKYYSTLFNFGSVASPIGLYVLNVKVTGNFYDREAEKQLRAKGLVRKAGEELKCFGAECFKLSFIVITGVTLLGMLVSLILVIRTRSFYKSDIYKKFREEAEAEVAGNGAVVAAGAPEETRKQ 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5703037 5707264 - Maker00009706 Lcy7g0624 637456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0624 592 Gene3D MFS general substrate transporter like domains 343 559 IPR036259 -
Lcy7g0624 592 Pfam Major Facilitator Superfamily 304 483 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy7g0624 592 MobiDBLite consensus disorder prediction 301 322 - -
Lcy7g0624 592 CDD MFS_Mch1p_like 28 544 - -
Lcy7g0624 592 SUPERFAMILY MFS general substrate transporter 28 556 IPR036259 -
Lcy7g0624 592 FunFam Nodulin family protein 339 560 - -
Lcy7g0624 592 Pfam Nodulin-like 29 274 IPR010658 -
Lcy7g0624 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 567 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0624 Lcy-Chr7:5703037 Lcy8g1243 Lcy-Chr8:38966669 2.31E-82 dispersed
Lcy7g0624 Lcy-Chr7:5703037 Lcy7g0626 Lcy-Chr7:5718486 0 proximal
Lcy7g0623 Lcy-Chr7:5689805 Lcy7g0624 Lcy-Chr7:5703037 2.38E-249 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0624 - - - 0.0