Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0626 ATGGTCGCCGCCGGTCCGGGAGGCGGCGGAGGAATCTCCAGCTGCTCCGACATACGAACCATCGCCGTCCACGTCATCACCGGGCGGTGGTTCGTGGTGTTCGCTTCACTTCTGATCATGGCGGCCGCCGGCGCCACCTACATGTTCAGCCTGTATTCCAACGACATAAAGTCAGTTTTGGGGTACGATCAAACCACGTTGAATTTGTTGAGCTTTTTCAAGGATTTGGGTGCAAACGTCGGCGTTTTGTCCGGTCTTATCAATGAAGTTACGCCGCCGTGGGTGGTTCTCTCCATCGGCGCCGTCCTCAATTTCTTTGGTTACTTCATGATTTGGCTCGCCGTCACTAAGAGGATCTCCACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTGTTGGAGCTAATTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTTACTTGCGTCAAGAACTTCCGCGAAAGTCGGGGCGTCGTTCTCGGTATCTTAAAGGGCTACGTCGGGCTTAGCGGCGCCATAATCACACAACTCTTCCACGCCTTCTACGGCTCCGACACCAAATCCTTAATCCTCCTCATCGGATGGCTCCCGGCGGCCATTTCCTTCGCATTTCTCCGAACAATTCGGATCATGAAAGTTATCCGACAGCCCAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCTCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAACTAATGTTCACTCAAAGCGAATTCGGCGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCCCTCGCCGTCGTAGTAATCGAAGAATACAACCTCTGGAAACTCAAAACCGCCGCCATTGGAGCTCCAAATCCAGTCCAGATCATAACAGAGAAGCCAAACATCCCAAAAATAGAGCATCAGAAACAAACCCAACAAAAACAAAAACAAAAGCAGCCATCTTGCTGGACGACGATCTTCAGCCCGCCGGAACGCGGCGAGGATTTCACGATTCTCCAAGCTCTCTTCAGCATGGACATGTTGATTCTCTTCTTCTCTGCAATCTGCGGCGTCGGCGGCACGTTGACGGCGATCGACAATCTGGGTCAGATCGGAATGTCTTTAGGATATCCAAAAAGAAGCATCAGCACATTTGTGACACTCGTGAGCATTTGGAATTACCTCGGCCGAGTCGCCTCTGGTTTCGTCTCTGAAATTGTTCTAACCAAATACAAATTCCCTCGTCCTTTGATGCTCTCTTTGACTCTGCTTTTGTCCTGCGTCGGCCATTTGATGATCGCTTTCGATGTCCCAAATGGGCTTTACGTGGCTTCGATCGTGATCGGATTCTGCTTCGGCGCGCAGTGGCCGTTGCTTTTCGCTATAATTTCGGAGCTTTTCGGGTTGAAGTATTACTCCACGCTTTACAATTTCGGGTCAGTGGCGAGCCCGATTGGGCTTTATGTTCTGAATGTGAAAGTGGCGGGGAATTTCTACGACAGAGAGGCGGAGAAGCAGCTGATAGCAAAAGGACTTGTGAGAAAAGCAGGGGAAGAGCTGAAGTGCTTTGGAGCAGAGTGCTTTAAGCTGTCGTTTATTGTGATTACGGGAGTTACTTTGTTGGGTATGCTTGTTTCTTTGATTTTAGTGATCAGAACGAGGAGTTTTTACAAGAGTGATATTTACAAGAAGTTCAGAGAGGAAGCTGAAGCAGAGGTTGCCGGAAATGGCGCGGTGGTGGCCGCCGAGAGATAA 1758 50.17 MVAAGPGGGGGISSCSDIRTIAVHVITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICVGANSQSFANTGSLVTCVKNFRESRGVVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLALAGFLMLMIIIESKLMFTQSEFGGSAAVVLLLLFLPLAVVVIEEYNLWKLKTAAIGAPNPVQIITEKPNIPKIEHQKQTQQKQKQKQPSCWTTIFSPPERGEDFTILQALFSMDMLILFFSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLLSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLIAKGLVRKAGEELKCFGAECFKLSFIVITGVTLLGMLVSLILVIRTRSFYKSDIYKKFREEAEAEVAGNGAVVAAER 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5718486 5721679 - Maker00010129 Lcy7g0626 637458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0626 585 Pfam Nodulin-like 29 274 IPR010658 -
Lcy7g0626 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 567 - GO:0016020(PANTHER)
Lcy7g0626 585 FunFam Nodulin family protein 339 560 - -
Lcy7g0626 585 CDD MFS_Mch1p_like 28 544 - -
Lcy7g0626 585 Gene3D MFS general substrate transporter like domains 342 559 IPR036259 -
Lcy7g0626 585 Pfam Major Facilitator Superfamily 307 483 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy7g0626 585 SUPERFAMILY MFS general substrate transporter 28 556 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1727 Lcy-Chr10:41647606 Lcy7g0626 Lcy-Chr7:5718486 8.05E-267 dispersed
Lcy11g0328 Lcy-Chr11:5523107 Lcy7g0626 Lcy-Chr7:5718486 2.77E-232 dispersed
Lcy11g0339 Lcy-Chr11:5749116 Lcy7g0626 Lcy-Chr7:5718486 2.62E-170 dispersed
Lcy11g0340 Lcy-Chr11:5756709 Lcy7g0626 Lcy-Chr7:5718486 4.43E-46 dispersed
Lcy1g1322 Lcy-Chr1:12759877 Lcy7g0626 Lcy-Chr7:5718486 5.91E-238 dispersed
Lcy5g0317 Lcy-Chr5:3031968 Lcy7g0626 Lcy-Chr7:5718486 1.03E-248 dispersed
Lcy6g1296 Lcy-Chr6:17132941 Lcy7g0626 Lcy-Chr7:5718486 1.30E-72 dispersed
Lcy7g0623 Lcy-Chr7:5689805 Lcy7g0626 Lcy-Chr7:5718486 3.16E-255 dispersed
Lcy7g0626 Lcy-Chr7:5718486 Lcy8g1243 Lcy-Chr8:38966669 5.79E-86 dispersed
Lcy7g0624 Lcy-Chr7:5703037 Lcy7g0626 Lcy-Chr7:5718486 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0626 - - - 0.0