Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0679 ATGCAAGGAGCTGAGGAGGACAATGCAATATCAGTCCAAGGAGACAACCAGGAAACGGGCCTCGAAAGAAGAACAGGCCAGAGGGTCATGCCAAGGTCGGAGAGATCGGGTCTTGGCCCAACCCATATGGTCGGCCTCGGCCTGAGGTCAAGGCGAGTGGGTCGAGTCCTCCCGCCTCCTTTCGGTCCCTGGTGCCTCTGGCCACCCCAGTTCCACTTGGTTCAGCCCTGGATTGCCTCCGAACGCCTAGAGACCCTAGAGCAGGAACATCATCGGAGGTGGTGTGGCAAGCACCACACCGGTGTGCAGGGTGCTCTGTTTGTTCTTCATCAAAACCCCTCGCCTTCAACCCTACGCTCTTCTGACTACTCTCCCTTCTTCTTCTTCTTCTTCAATGAAATTGAATTTGTGTTCCGTTTTCCTGAGATAGACGATTTTTTCTCTTCTGGGTGCTTTCGATTGGGGGAATTCTTCGGCTGTTCTGTAGCTACTCTTCATTTTGATCCTCTTCTGGTGATTGTTTCTCTTTGTACTTTAATGGCAGGAATGTTTAATGGGGAGGGATCGTCGTCGGTAACTTCGTCGCCTTTGCAGCTCTTTCCATGGTCGTTATCGCCCGGTATAGGATCGCCATACCCTTTTCTAAGGGAGCTTAAGTCTGAGGAGAGGGGCTTGTGTCTGATTCACCTTCTTCTTGCCTGTGCCAACCAAGTTGCTATTGGTAACATTGAAAATGCTAATGTTGGCCTTGAGCAAATTTCCCACCTCGCTTCGCCGGACGGGGACACAATGCAGCGGATTGCTGCCTACTTCACGGAGGCACTCGCCGATCGGATACTTAAATCATGGCCTGGCTTACACAAAGCCTTGAACTCTACCAAGATCTTGTCAGTCCCTGAAGAGATTCTTGCTCAGAGATTGTTCTTTGAACTGTGTCCTTTCTTGAAGCTTGCATATGTGATAACTAATCAGGCTATCATAGAAGCTATGGAGGGAGAAAGGATGATTCATATTATTGATTTCAAATCATGTGAGCCTGCCCAATGGATAAACCTTCTTCAGACATTGAAAGATAGGCCAGACGGCCCGCCCCACTTGAGAATAACCGGAATTCACGAACAGAAGGAGGTGTTGGAACAAATGGCTCTTCGGCTTACCGAAGAGGCCGAAAAATGGGACATACCATTTCAGTTCACCCCTGTTGTTAGCAAGTTAGAGAACCTTGACCTTGAAAGTTTAAGGGTCAAGACAGGGGAAGCACTTGCAGTCAGCTCTGTTCTTGAGCTTCACTCGATTTTAGCTACCGACGATGATAAGAAAACATCGCCTTCTGCATCGAAGAACTTGCAGAAACTCCTTCGTATGAAGCAGCGAACTCTCGGAGAGTGGCTCGAGACAGATTCGTTGCAAGTTTTTAGTAGCCCTGATTCAGCTTCAGTATCTTCCCCATCAGGATTGAATCCTTCCCAAAAGATGAATAGCTTTTTGAGTGCACTCTGGGGCCTTTCTCCAAAAGTGATGGTAATAACTGAGCAAGAATCAAACCTGAATGGATCAGCCTTCATGGAGAGAGTACTAGAGGCACTAAACTTCTATGCTGCATTGTTTGATTGCTTGGAGTCGACCGTGTCGAGATCGTCCATCGAGCGACAGAGGGTCGAGAAGATGCTTTTAGGAGAGGAAATAAAAAACATCATTGCTTGCGAGGGGGCGGAGAGAACGGAGAGGCACGAAAAGCTCGAGAAATGGATACTAAGGCTCGAATCCGTGGGGTTCGGGAGGGTTCCGTTGAGCTATCATAGTATGTTACTGGGAAGTAGATTGTTGCAGAGTTATGGATATGATGGTTACAAAATCAAAGAGGAGAATGGATTTTTGTTCATCTGTTGGCAAGATAGGCCTCTTTTTTCAGTCTCAGCTTGGGGGTTTCAAAGGCAAAGCTGA 1944 47.89 MQGAEEDNAISVQGDNQETGLERRTGQRVMPRSERSGLGPTHMVGLGLRSRRVGRVLPPPFGPWCLWPPQFHLVQPWIASERLETLEQEHHRRWCGKHHTGVQGALFVLHQNPSPSTLRSSDYSPFFFFFFNEIEFVFRFPEIDDFFSSGCFRLGEFFGCSVATLHFDPLLVIVSLCTLMAGMFNGEGSSSVTSSPLQLFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSILATDDDKKTSPSASKNLQKLLRMKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLSALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWILRLESVGFGRVPLSYHSMLLGSRLLQSYGYDGYKIKEENGFLFICWQDRPLFSVSAWGFQRQS 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6284297 6290990 - Maker00009872 Lcy7g0679 637511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0679 647 Pfam GRAS domain family 227 641 IPR005202 -
Lcy7g0679 647 MobiDBLite consensus disorder prediction 1 20 - -
Lcy7g0679 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 221 641 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lcy7g0679 647 MobiDBLite consensus disorder prediction 1 41 - -
Lcy7g0679 647 ProSiteProfiles GRAS family profile. 218 642 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0381 Lcy-Chr13:4354938 Lcy7g0679 Lcy-Chr7:6284297 2.16E-13 dispersed
Lcy2g1246 Lcy-Chr2:13179612 Lcy7g0679 Lcy-Chr7:6284297 5.53E-202 dispersed
Lcy7g0679 Lcy-Chr7:6284297 Lcy8g1366 Lcy-Chr8:40399681 1.84E-62 dispersed
Lcy7g0679 Lcy-Chr7:6284297 Lcy6g1707 Lcy-Chr6:32744414 2.88E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20404 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0679 - - - 0.0