Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0695 ATGGCTCTTCTCTCTGCTGAGGCTCAGTTTCATGTCTTGGCTGTTGATGACAGCCTCGTTGATCGGAAGCTGATCGAAAGACTCCTCAAAACCTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTACTCGGTTTGGTTAGAGAGAGAAATGGAAGCACCCATTCTCCTGTTTCCCCTGAAAATCATCATCACCATCATCAGGAAATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGCAAAAATTTTGAATGGAAAATCTCATCTGGTTTTGCAGGGATCTGACTCACTTAAAGACATTCCTGTCGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTCTGCTAAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATTTGTAGAGGAAAAGCCAAGGAAATGGAATCCAACAATCTCAAGAGAAAGGAAATGGGGTCTGCCCAATCATCTGAGAGAACAAGAACAAAATACAATGATCATTCCTTCTAA 597 41.04 MALLSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPVSPENHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKAKILNGKSHLVLQGSDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMESNNLKRKEMGSAQSSERTRTKYNDHSF 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6447304 6449322 - Maker00010022 Lcy7g0695 637527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0695 198 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 186 IPR045279 GO:0009736(InterPro)
Lcy7g0695 198 CDD REC_typeA_ARR 12 158 - -
Lcy7g0695 198 MobiDBLite consensus disorder prediction 175 198 - -
Lcy7g0695 198 Gene3D - 11 195 - -
Lcy7g0695 198 ProSiteProfiles Response regulatory domain profile. 11 163 IPR001789 GO:0000160(InterPro)
Lcy7g0695 198 SMART REC_2 10 159 IPR001789 GO:0000160(InterPro)
Lcy7g0695 198 Pfam Response regulator receiver domain 12 155 IPR001789 GO:0000160(InterPro)
Lcy7g0695 198 SUPERFAMILY CheY-like 10 155 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1833 Lcy-Chr1:20351997 Lcy7g0695 Lcy-Chr7:6447304 4.37E-62 dispersed
Lcy2g0621 Lcy-Chr2:5307640 Lcy7g0695 Lcy-Chr7:6447304 1.57E-31 dispersed
Lcy5g0961 Lcy-Chr5:17041208 Lcy7g0695 Lcy-Chr7:6447304 6.28E-64 dispersed
Lcy7g0216 Lcy-Chr7:1896514 Lcy7g0695 Lcy-Chr7:6447304 3.87E-42 dispersed
Lcy7g0695 Lcy-Chr7:6447304 Lcy9g1560 Lcy-Chr9:40729183 1.43E-48 dispersed
Lcy10g1232 Lcy-Chr10:35001365 Lcy7g0695 Lcy-Chr7:6447304 2.26E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20406 None None None None Lcy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0695 K14492 - csv:101207245 275.404