Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0734 | ATGGGAAAGCTAAGCTTGAGCGGCTGCAATAGTTTCCTTGAGAATTCAAAACCTTACTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTTAGTAGAGGGATGAGCCATTACGTCCTCGTCGTTTATCGACATGCCTTCGCTACCGCTTCCATTGCCCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATCACACTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATACACCTCACCAACCTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTCAGGATGGAAAAATTGGACATGAAGAAAGTGAGATGCCAAGCAAAAATTTTGGGAACTTTAGTGACAGTGGCTGGAGCAATGCTGATGACTTTGTACAAAGGCCCACTTGTTCAAATGGCTTGGTCTAAACATTCTCATGCTTCCACAAACAATAATGTTTCTGATTCTAATGCCAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAGGCATTGAAGACATACAAGAACCACCAGTTCACTCTCACTACACTGGTGTGCTTTCTTGGGACTTTGCAGGCCATTGCTGTGACTTTGGTGGCTGAGCACAAAGCTTCTGTTTGGAGAATTGGTTGGGATATGAACCTTCTAGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATATTATGTACAAGGGCTGGTGATGAAGAAGAGGGGACCTGTATTTGCAACTGCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCTTTCATCCTTGCTGAAAAGATCTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTATTTGGGCTTTATTCAGTCCTTTGGGGAAAGCACAAGGAGAATTTGGAGAGCAAAAGTGCTTCTGTTGCTGATGAAATACCAGAAGCAATTAAAGCTAATAATTCTTCTCAACCAAATAATAATAATAATAATAATAATATTGCAAATCTTGAAGCTAATGAGATGATGATCAAAGCTCCCAATAAGCTAATTTCCAATAATAATTCACTTTTCATTTCCATGCCTGACCCTGAAAACCCCATCAAACCCAACCAAATCCCAAGAGAATGA | 1245 | 41.29 | MGKLSLSGCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLDMKKVRCQAKILGTLVTVAGAMLMTLYKGPLVQMAWSKHSHASTNNNVSDSNANKDWFKGSIFLIIATLAWASLFVLQNQALKTYKNHQFTLTTLVCFLGTLQAIAVTLVAEHKASVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLESKSASVADEIPEAIKANNSSQPNNNNNNNNIANLEANEMMIKAPNKLISNNNSLFISMPDPENPIKPNQIPRE | 414 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7054917 | 7058780 | + | Maker00009623 | Lcy7g0734 | 637566 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0734 | 414 | Pfam | EamA-like transporter family | 193 | 332 | IPR000620 | GO:0016020(InterPro) | |
| Lcy7g0734 | 414 | Pfam | EamA-like transporter family | 19 | 159 | IPR000620 | GO:0016020(InterPro) | |
| Lcy7g0734 | 414 | PANTHER | WAT1-RELATED PROTEIN | 20 | 349 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| Lcy7g0734 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 52 | 162 | - | - | |
| Lcy7g0734 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 252 | 337 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g1942 | Lcy-Chr10:43488164 | Lcy7g0734 | Lcy-Chr7:7054917 | 1.54E-49 | dispersed | |
| Lcy13g0364 | Lcy-Chr13:4047832 | Lcy7g0734 | Lcy-Chr7:7054917 | 1.37E-80 | dispersed | |
| Lcy1g1770 | Lcy-Chr1:18852906 | Lcy7g0734 | Lcy-Chr7:7054917 | 1.08E-147 | dispersed | |
| Lcy2g2366 | Lcy-Chr2:49771275 | Lcy7g0734 | Lcy-Chr7:7054917 | 4.93E-80 | dispersed | |
| Lcy4g1766 | Lcy-Chr4:43696502 | Lcy7g0734 | Lcy-Chr7:7054917 | 2.42E-81 | dispersed | |
| Lcy5g0821 | Lcy-Chr5:12921925 | Lcy7g0734 | Lcy-Chr7:7054917 | 6.68E-157 | dispersed | |
| Lcy5g0823 | Lcy-Chr5:12972034 | Lcy7g0734 | Lcy-Chr7:7054917 | 6.31E-137 | dispersed | |
| Lcy5g1678 | Lcy-Chr5:39038859 | Lcy7g0734 | Lcy-Chr7:7054917 | 7.93E-55 | dispersed | |
| Lcy7g0734 | Lcy-Chr7:7054917 | Lcy9g1576 | Lcy-Chr9:40945254 | 1.40E-105 | dispersed | |
| Lcy10g1214 | Lcy-Chr10:34795201 | Lcy7g0734 | Lcy-Chr7:7054917 | 2.13E-109 | wgd |
Pathway information