Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0738 ATGCAAAATCATATTCCCCTTGAAGTGGAGTTAGACGTGACCGAAGCGAATGAAGACTTGTCAGAAGGGAAATCGATCATCGATGCAATCTCTAATCTCGTTGCTCGTCTGCAAGATTTCTTGCAATTTTCTGCTGTTGTTTCTTCGTTTTTCATATTTTTTAATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCCCGAATTAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTTGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTGTTCCTGCAAGACCTCTGTGATCGTACATATGAGATAACTCTACAAAGAGGAGCAAAGACAATGAATTCATTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCAGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCCCTTGGTGATGAGGGCAATGATATGGATGAGTTGAAGAAGAGCAAGATGCATGACATGAGCCATGGCAGCACTGGTAGAGGAAGAGGGCGAGGACGAGGAAGGGGTCGAGGACGGCCTGCTCGAACAGCCGAAAGGGACCACTTCCAACCCAACCCCGATGTCGACCCTTGCACATCTATAGAAAACAGGAACAAGAACCCCAACCCAGATGTGCACATGGAGCATCACGTCGAGCCTAGCGAAACATCAAAAGAAGTAGGTGAAGCCAATCAAGCCGTCCAAAACTTCGATCTCAATGCCGACGTCAATACCAGCGAAGAATCCAAGACTGTAGCAGCAGCAGTACCAGACGTGCCCGTCGAACCGGCCGCGCCAACTACTACCGAGTCCGAGGCTAAAGCTGCTGATGAATTCCCTGCCTGGCCTCTTTCTGACGTGGACAAAATGGCAATTGACCCTCTCCAATATGCTCATCTCAGCACAAGAGTAGATGAAGAAGAGGAAGATTACGATGAAGAGGAGTAA 1038 46.63 MQNHIPLEVELDVTEANEDLSEGKSIIDAISNLVARLQDFLQFSAVVSSFFIFFNPFECLESDAMRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDMDELKKSKMHDMSHGSTGRGRGRGRGRGRGRPARTAERDHFQPNPDVDPCTSIENRNKNPNPDVHMEHHVEPSETSKEVGEANQAVQNFDLNADVNTSEESKTVAAAVPDVPVEPAAPTTTESEAKAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7103088 7109233 - Maker00009709 Lcy7g0738 637570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0738 345 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 67 237 IPR050568 GO:0001046(PANTHER)|GO:0005634(PANTHER)|GO:0016251(PANTHER)
Lcy7g0738 345 SUPERFAMILY Histone-fold 68 153 IPR009072 GO:0046982(InterPro)
Lcy7g0738 345 MobiDBLite consensus disorder prediction 208 222 - -
Lcy7g0738 345 MobiDBLite consensus disorder prediction 154 196 - -
Lcy7g0738 345 FunFam dr1-associated corepressor homolog 65 150 - -
Lcy7g0738 345 MobiDBLite consensus disorder prediction 154 246 - -
Lcy7g0738 345 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 72 135 IPR003958 -
Lcy7g0738 345 Gene3D Histone, subunit A 59 150 IPR009072 GO:0046982(InterPro)
Lcy7g0738 345 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0738 Lcy-Chr7:7103088 Lcy8g2031 Lcy-Chr8:46561147 6.33E-57 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20412 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0738 K21752 - csv:101209714 461.07