Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0780 ATGTCTCGGAAATCTCAGGCGATGATTTCACTGCAATCTACTAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCGCAAGCTGCTGAAGCTTTGGAAGAGCCTTATGATCGGAATGTGAAAAACATGGAAGATAGTTCGTTAGTTAATGGTGAAAATGGTGCTTCTGGAGATGATGCCGTCAATCGACTTCAATGCAGTATGAACAATATTGACGAGCTGAATGAGGACTCGCCATATAATTGCAATATTACAACAGTGGAAGAAAGACCGACCATGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAGTGTCGCCTTCGCATAGTGAAAGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTTCAGTCTTGGTTTAAACTTTCAAATGGGAATTGGGATCTTGTAAAGATACTGTCATCTGCAGGAACAGAGTCAGTAGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAAATTTGATTCCTGCAAATCCAGATATCCTTGATGGCGTTGATGATCTTATGCAACTCAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGGCCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAATGATTACATTGAAGGATACAAGCGCAAAACAGTCAATAGCCCGCATGTTTATGCTATTACAGATACAGCCATAAGAGAGATGATTCGAGGGCACTTGGCTCGAAAGAAAAATAGAATTTTTAGAGGGGTGGAGTCGGAGAAATCCACGAATGAGCTGTGGGAGATGCTTAGCGGTGAAAGTGGAGCTGGAAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCTGCCCTTGGCGGTGGAAGTGGAATAGAATATGAGATATTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGCTTTGGAAAATTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCTGATGGTAAATCTGACTTTGATTGTGCTGCTCTTGATGAACCCCGGACAGTTTTGCTTGAAAAGTCTAGAGTTGTTCAATGCACGGAGGGAGAAAGGTCATACCACATCTTTTATCAACTCTGTAGTGGGGCTCCTCCTGCACTTAAAGAGAGACTAAACTTGAGAAGAGCGGAAGAGTACAAATATCTCAGCCAGAGCAATTGTTTTTCAATAAGTAGAGTAAATGATGCTGATGATTTTCGTGTAGTCATGGAAGCACTAGATGTTGTCCATATCAGCAAAGAAGATCAGCACAGTGTATTTGCAATGCTTGCTGCTGTGCTGTGGCTGGGAAATGTTTCATTTAGTGTGATAGACAATGAGAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACTGTTGCTAAACTGATTGAGTGTGAGATCGAGGAGCTTAAACTAGCTTTATCAACCCGAAAAATGAGAGTTGGGAATGACAGCATTATCCAAAAGCTTACTTTATCTCAGGCAAGAAACTCCAAATTGCAAGTAGAACTCTCTACTGTTAAACTCCTAATTGCTATTGATACTAGAGATGCTTTGGCAAAGTCAATATACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGACGCACTGGCAGATCTATCAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGAAATAGTTTTGAACAGTTCTGTATTAACTATGCAAATGAGAGACTACAGCAGCATTTCAATCGTCACTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATTGACTGGGCAAAAGTTGATTTTGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTATTGTCCCTGCTAGATGAGGAGTCTACTTTCCCAAATGGTTCAGATCTGACATTTGCGAACAAGCTTAAGCAGCATTTGCGTTCTAATTCTTCTTTTAGAGGAGAACGAGGGAAAGCCTTCACTGTCTGTCATTATGCAGGAGAGGTCACTTACGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCTATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCGGATTTTTGCATCCAATATGCTAAATCAATCAGAGAAGTCCATAGGTGGCACTTTACATAAATCTGGTGGTGCAGAATCCCAAAAACTAAGTGTTGCAAGAAAGTTTAAGGGTCAATTATTCCAATTGATGCTTCGTCTTGAAAATACAACACCTCATTTCATCCGTTGCATCAAGCCCAACAACCTTCAGTCTCCCAGATTGTATGAGCAAGGACTTGTATTACAGCAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCAGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAGCATTGCATCGCAGGATCCACTAAGTGTCTCAGTTGCAATTCTTCATCAATTTGATATAGTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTGGAAGATACAAGAAACCGCACCCTCCATGGGATTCTTTGTGTTCAAAGCTGTTACAGAGGGCACCTTGCTCGACGCCACCTCAAAGAGCTGAAGAGAGGGATTTCCGTACTTCAGTCATGTATTAGCCTCCCTTTTGCACGTGGGGAGCAAACCAGAAAAGAATATGCAATCTTGATACGAAGGCATAGGGCCGCTATTTCTATTCAGAAGTGTGTGAAAGCCAGAATTGCTAGAAAACGTTTGGAGAAAGTCTGTGATGCATCACTTGTGATACAATCAGTTATCCGTGGCTGGTTGGTCAGGAGATGCTCGGGAGATATAGGATTAATGACATCTGGTGGCCTGACGGCAAATGGGTCGGGTGAGGTGCTTGTTAAGTCATCATTCCTTGCAGAATTACAACGCCGTGTCCTGAGGGCAGAGGCTGCTTTGAGAGATAAAGAAGAGGAAAACGACATCCTCCATCAGCGTCTTCAACAGTACGAGAACCGTTGGTCAGAGTATGAACTGAAAATGAAGTCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCTAGCCTCTCCATTGCGAAGAAAAGCTTAGCCGTTGATGATTCAGAGAGAAACTCTGATGCATCAGTCAACGCAAGTGATGACAGAGGATACAGTTGGGAAGTGGGTAGTAACAACACAGCTAATGAAAGCAATGGAGTCAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGGTTGGCTGAAGAATTCGAACAAAGAAGTCAAGTCTTCGGCGACGATGCGAAGTTCTTGGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTCGACCCAGATAGGGAACTCAGAAGGTTGAAACAGATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGCGAAACGAAAGTGATTTTGAATAAGCTTGGGAATGAAGGTGCCATGGATAAGGTGAAAAAGAAGTGGTGGGGAAGGAGGAACAGCACAAGGTATAGTTAA 3678 41.87 MSRKSQAMISLQSTKSMPVNSRFMIPQAAEALEEPYDRNVKNMEDSSLVNGENGASGDDAVNRLQCSMNNIDELNEDSPYNCNITTVEERPTMDDGEDGFMPLPSPSVSPSHSESRWGDTSSYTPRKILQSWFKLSNGNWDLVKILSSAGTESVVSLTDGKVLKVKAENLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIEGYKRKTVNSPHVYAITDTAIREMIRGHLARKKNRIFRGVESEKSTNELWEMLSGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISDGKSDFDCAALDEPRTVLLEKSRVVQCTEGERSYHIFYQLCSGAPPALKERLNLRRAEEYKYLSQSNCFSISRVNDADDFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIIQKLTLSQARNSKLQVELSTVKLLIAIDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGSDLTFANKLKQHLRSNSSFRGERGKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPRIFASNMLNQSEKSIGGTLHKSGGAESQKLSVARKFKGQLFQLMLRLENTTPHFIRCIKPNNLQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIASQDPLSVSVAILHQFDIVPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILCVQSCYRGHLARRHLKELKRGISVLQSCISLPFARGEQTRKEYAILIRRHRAAISIQKCVKARIARKRLEKVCDASLVIQSVIRGWLVRRCSGDIGLMTSGGLTANGSGEVLVKSSFLAELQRRVLRAEAALRDKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDKVKKKWWGRRNSTRYS 1225
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 7488959 7503706 - Maker00009932 Lcy7g0780 637612
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0780 1225 Gene3D Myosin VI head, motor domain, U50 subdomain 446 571 - -
Lcy7g0780 1225 ProSiteProfiles Myosin motor domain profile. 179 896 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 Pfam Myosin head (motor domain) 181 884 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 Gene3D - 594 786 - -
Lcy7g0780 1225 SMART MYSc_2a 173 897 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 Gene3D - 830 897 - -
Lcy7g0780 1225 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 MobiDBLite consensus disorder prediction 1109 1125 - -
Lcy7g0780 1225 PRINTS Myosin heavy chain signature 635 663 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 PRINTS Myosin heavy chain signature 323 350 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 PRINTS Myosin heavy chain signature 582 610 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy7g0780 1225 ProSiteProfiles IQ motif profile. 900 926 - -
Lcy7g0780 1225 Pfam IQ calmodulin-binding motif 902 919 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 Pfam IQ calmodulin-binding motif 978 993 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 ProSiteProfiles IQ motif profile. 952 979 - -
Lcy7g0780 1225 Gene3D Kinesin motor domain 178 829 IPR036961 -
Lcy7g0780 1225 ProSiteProfiles IQ motif profile. 250 276 - -
Lcy7g0780 1225 Gene3D - 954 995 - -
Lcy7g0780 1225 Gene3D - 900 953 - -
Lcy7g0780 1225 FunFam Myosin heavy chain 389 445 - -
Lcy7g0780 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 948 IPR027417 -
Lcy7g0780 1225 Gene3D - 389 445 - -
Lcy7g0780 1225 SMART iq_5 920 947 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 SMART iq_5 897 919 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 SMART iq_5 974 996 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 SMART iq_5 951 973 IPR000048 GO:0005515(InterPro)
Lcy7g0780 1225 CDD MYSc_Myo8 193 884 IPR036022 -
Lcy7g0780 1225 PANTHER MYOSIN 132 1215 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Lcy7g0780 1225 Coils Coil 1021 1069 - -
Lcy7g0780 1225 MobiDBLite consensus disorder prediction 1094 1125 - -
Lcy7g0780 1225 FunFam Unconventional myosin-XIX 594 786 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g0248 Lcy-Chr3:7827042 Lcy7g0780 Lcy-Chr7:7488959 1.57E-24 dispersed
Lcy4g2008 Lcy-Chr4:46557902 Lcy7g0780 Lcy-Chr7:7488959 9.79E-131 dispersed
Lcy7g0780 Lcy-Chr7:7488959 Lcy9g1262 Lcy-Chr9:37239621 6.57e-313 dispersed
Lcy7g0780 Lcy-Chr7:7488959 Lcy3g1285 Lcy-Chr3:38810644 5.02E-28 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0780 - - - 0.0