Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0784 ATGCTGCTCTCAGAGCCCCCAAAGAGCAACAACAATACCAAATTAATGCACATCAAAGAATTCTTTGGCTTCTCTCACTCCTCTTCCTCCAAATCCCTCCACTCCTCTTCTTCCTTCCCCTCCTCCGCCCGCCGCAGACCGCCGCCGGCCAGCAATGACCCTTCCGAATCGGCGGCCATGGAAGAGGCCATCACAAACTCAGAACCCATCATCACCAAATGGGACCCGGACTCCTCGGAGTTCAATAGAATCACCTTCCTCTTCCGCCACGGCCGAGCCGAAGCCGACGAGTTTCTGAACTCCGTCAACAGCCTCCGGCGAGCGATGGACTTTTTCATATCCGAAAATTCCACCTCCACCGTCCTCGTTCCCGCTCAAAAGCTGATGCAGGCTGCCATGAGACGACTCGAGAAGGAATTTTACCAGATTTTGAGTGAGAATCGCCAGAATCTCGACCCGGAATCCATCTCCGGCAGGTCCTCCGATCGGTCGACGGCCGACGGGGAAACCGGTGGGGATTCCGTCTCCGACGTCGACAGAGTCTCGGCGGACTTGAAATCGATCGCTGACTGTATGATCGATTCTGGGTATGGGAAAGAGTGCGTAAAAATCTATACAGTAATCCGAAAATCGATCGTCGATGAAACTCTGTATCGGCTCGGAACAGAGAAGTTCAAACTTTCGAGAATTCAGAGATGGAATTGGGATTCAGTCGAGCACGTGGTCAAGAACTGGATGAATTCGATTAAGTTTGCCGTGAACACTCTGTTTCGTGGCGAGAAAATTCTCTGCGATCATGTTTTTTCGAGATCGGAGAAAATCAGAGAGTCCTGTTTTTCAGAGATCACAAAAGATGGTGCGATCACTTTGTTCAAGTTCCCAGAATTGGTCGCAAAAGGGAAGAAAGATTCCGATAAAATCTTTCTGTTACTGGAGCTTTACGAGGCGAATTCCGACGTCTTGCCGGAAATTGAAGTCATATTCGACTCTGTTTCTACATCCGCCATTAAAGCGCAAGCTCAAACGTCGATGACGAAGCTCGCAGATTCAATCCGCGATATTCTGTGCGAATTCGAGTCGACAATCCAGAAAGACTCGTCCAAAACTCCGGCACCCGGCGGCGGAATCCACCCACTGACCCGATCGGCAATGAGCTACATCTCGTCACTGGGAGACTACGCCGTAACCCTCTCCGACATCCTCTCCGCCGGAAACTCTCCGATTCCGGCGTCTTACGTCGAGACCCACGCCGCCGCCGACGCACTCTCGTCGCCGGTGGCGGCGCAGGTCGGGTGGCTGATTCTCGTCCTCCTCTGCAAACTGGACACGAAAGCAGAGCTCTACAGAGACGTCTCGCTATCCTATCTCTTCCTCGCGAACAACCTGAACTTCATCGTGAAGACGGTGACGGCGACGAATCTGAAGATGCTCGTCGGCGGCGAGTGGGTGGCGAATCACGCGAGCAAGATGAAGCTGTACGCGGCGAACTACGAGGCGACAGCGTGGAACAGAGTGATGGCGTCGCTGCCGGAGAGGGGGTCGCCGGAAGTGGGGTCGCCGGAGACGGCGAAGGAAGGGTTCAAGAAGTTCAATGCGGCGTTTGAAGAGGCTTACCGGAAGCAGACGTCGTGGAGAGTGGAGGACGGGAAGCTGAGAGATGAGCTGAAGATGTCGATCGCGAAGAAGGTGCTGCCGATGTACAGGGAGTTCTACGAGGGGTGTGTTGAGAAGGTGGGTGTAGAGAGAGGGGTTTTGAGGTTTTCGCCTGATGATTTGGGCAATTATTTGTCGGATTTGTTTCATGGGGTTTCTTCTTCTGGGAGTAGTTCTTCTTTGTCTTCCTCTGGGAGTGTCCTTCCGCCACCGTCGGGAGTCTGGAACTCCTCTGTCACCTCCGCCACCTCCGCCGAAGCGTTCCTTCCTCGTCCGGCACCTCACTGGGGCCACCTCCGTCGGACAGCGACAGCGCTGACCTACACGCCGCCCGATTTTAAACCGGTCGCCCTCCGTCTGCCACATAACGAAAGCCAAAAGTCAGAAACACACCCGTCGCCATGGGAGAACCTCCATTTTCAGCCGTCATTTTCCATCGATCTTAGCATCTCATCGTCACCGTCTTTGCTCCCAACTACCAAGGGACCCACCATCTCTCACAGACTCTTCTCCTTTCTGCAAAACCCTAAATCCTACGTGCCACCATCTCTCCATGACGCGTCAAAGCCCTTCAGCCCTAAAATTTCAGCGCCCTTTCAGATGGAAATGGAAGAGAAACTGTTCTCCTTATCAACGCAATCGGAGAAGAGAATTGCCCTGAGAGGCAATCGAATTAATCTCATTGGTTTGAGTGGTAATGGATGCAAAGCTTTTCGAAGGTCTCTAATCGATTCTTCCATGGAATCGCAATGA 2406 52.99 MLLSEPPKSNNNTKLMHIKEFFGFSHSSSSKSLHSSSSFPSSARRRPPPASNDPSESAAMEEAITNSEPIITKWDPDSSEFNRITFLFRHGRAEADEFLNSVNSLRRAMDFFISENSTSTVLVPAQKLMQAAMRRLEKEFYQILSENRQNLDPESISGRSSDRSTADGETGGDSVSDVDRVSADLKSIADCMIDSGYGKECVKIYTVIRKSIVDETLYRLGTEKFKLSRIQRWNWDSVEHVVKNWMNSIKFAVNTLFRGEKILCDHVFSRSEKIRESCFSEITKDGAITLFKFPELVAKGKKDSDKIFLLLELYEANSDVLPEIEVIFDSVSTSAIKAQAQTSMTKLADSIRDILCEFESTIQKDSSKTPAPGGGIHPLTRSAMSYISSLGDYAVTLSDILSAGNSPIPASYVETHAAADALSSPVAAQVGWLILVLLCKLDTKAELYRDVSLSYLFLANNLNFIVKTVTATNLKMLVGGEWVANHASKMKLYAANYEATAWNRVMASLPERGSPEVGSPETAKEGFKKFNAAFEEAYRKQTSWRVEDGKLRDELKMSIAKKVLPMYREFYEGCVEKVGVERGVLRFSPDDLGNYLSDLFHGVSSSGSSSSLSSSGSVLPPPSGVWNSSVTSATSAEAFLPRPAPHWGHLRRTATALTYTPPDFKPVALRLPHNESQKSETHPSPWENLHFQPSFSIDLSISSSPSLLPTTKGPTISHRLFSFLQNPKSYVPPSLHDASKPFSPKISAPFQMEMEEKLFSLSTQSEKRIALRGNRINLIGLSGNGCKAFRRSLIDSSMESQ 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7538992 7546607 - Maker00009969 Lcy7g0784 637616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0784 801 Pfam Exo70 exocyst complex subunit C-terminal 243 598 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lcy7g0784 801 Gene3D Exocyst complex component Exo70 70 609 - -
Lcy7g0784 801 MobiDBLite consensus disorder prediction 25 45 - -
Lcy7g0784 801 MobiDBLite consensus disorder prediction 25 61 - -
Lcy7g0784 801 MobiDBLite consensus disorder prediction 151 171 - -
Lcy7g0784 801 PANTHER EXOCYST COMPLEX PROTEIN EXO70 42 602 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Lcy7g0784 801 Pfam Exocyst complex component Exo70 N-terminal 68 146 - -
Lcy7g0784 801 SUPERFAMILY Cullin repeat-like 64 601 IPR016159 -
Lcy7g0784 801 MobiDBLite consensus disorder prediction 151 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0784 Lcy-Chr7:7538992 Lcy8g1841 Lcy-Chr8:44721348 3.53E-171 dispersed
Lcy5g0233 Lcy-Chr5:2247427 Lcy7g0784 Lcy-Chr7:7538992 2.53E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0784 K07195 - csv:101221801 990.334