Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0799 ATGGCGACTTCGACGCTTGCCGGCACCATCGGCTTCTCACAGTCCTCTTCTTGCTCAGATATTTCAGTTTCCTGCATTCCCTTTTCAACCAGGAGATTAAGATTCTCGAGCACCATTCTTTCTCCTCTTAACCTTCAACAAAAAGCATCTGGAAGAAGAGCCAGACCTCTAATTGCTGTGAAAATGGCTGCTGAGTATGTTACTTTCTTCCCTTCTTTCTATGCTGGACGAGAAAATGGAGGAATAGAATTTTCTGTCTGTGTTTTCACTTTTTGTTTTGTGTGTGAAAGAGCTTTTCAGGAAGTTCTTCCTCCAGCCCTCACTTCGGCTTCAGAACCACCTCCTGTCTTCGATGGAACAACGAGGCTTTATATTTCTTATACATGCCCTTATGCGCAGCGTGCGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTGCCAATAAATCTACAAGATAGGCCGTCTTGGTACAAGGAAAAAGTTTACCCACCTAACAAGGAGGCAATTGCCTCTGTCCCTCCTTTCTTCTTCGCTCTTGCTCCAATGAGGGATTTCGACTTTAGGAAGAAGCGAGAGAGAAGATGGCCATTGTTAAATACAATCAAGCTGCTGTCTACTTCCTCTTCGATGTTCTTGACTTCTGAATCGCAGGTACCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATCGACAGCAATTTTGAGGGGCCTTCATTATTTCCTGATGATCCGGGAAAGAGAGAGTTTGCTGAAGAGTTGATAAACTACGTTGACTCTTTCAGGGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGGCCAGTTTAGTTTGGTGGATATAGCGTATGCACCCTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAGACATATGACATTACTGCTGGCAGGCCAAAACTGGCAGCTTGGAATGAGGAGATGAACAAGATCGAGGGGTACCGACAAACAAAGAGCGATCCACGGGAGCTTGTTGATAGCTATAAGAAGCGATTCTTGGTAATTCTTTCTGACATTCCCAGATATAAATTCCATAAAGACCCCTTCGTGAAAGCCCCAGTAGCAGAGGGTCCACATGGCAATGGTTACTGA 1161 43.32 MATSTLAGTIGFSQSSSCSDISVSCIPFSTRRLRFSSTILSPLNLQQKASGRRARPLIAVKMAAEYVTFFPSFYAGRENGGIEFSVCVFTFCFVCERAFQEVLPPALTSASEPPPVFDGTTRLYISYTCPYAQRAWITRNCKGLQNKIQLVPINLQDRPSWYKEKVYPPNKEAIASVPPFFFALAPMRDFDFRKKRERRWPLLNTIKLLSTSSSMFLTSESQVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELINYVDSFRGSVVSSFKGDGNEAGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWNEEMNKIEGYRQTKSDPRELVDSYKKRFLVILSDIPRYKFHKDPFVKAPVAEGPHGNGY 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7719744 7724206 + Maker00010046 Lcy7g0799 637631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0799 386 PANTHER GLUTATHIONE S-TRANSFERASE L1 220 286 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Lcy7g0799 386 Pfam Glutathione S-transferase, N-terminal domain 128 245 IPR004045 -
Lcy7g0799 386 Gene3D - 249 289 - -
Lcy7g0799 386 Gene3D - 290 359 - -
Lcy7g0799 386 Pfam Glutathione S-transferase, C-terminal domain 289 327 - -
Lcy7g0799 386 SUPERFAMILY Thioredoxin-like 110 252 IPR036249 -
Lcy7g0799 386 SUPERFAMILY GST C-terminal domain-like 247 355 IPR036282 -
Lcy7g0799 386 Gene3D Glutaredoxin 202 248 - -
Lcy7g0799 386 Gene3D Glutaredoxin 95 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0248 Lcy-Chr5:2345315 Lcy7g0799 Lcy-Chr7:7719744 6.77E-88 dispersed
Lcy5g0249 Lcy-Chr5:2351124 Lcy7g0799 Lcy-Chr7:7719744 1.25E-73 dispersed
Lcy1g2369 Lcy-Chr1:38022018 Lcy7g0799 Lcy-Chr7:7719744 4.18E-13 transposed
Lcy5g0245 Lcy-Chr5:2332291 Lcy7g0799 Lcy-Chr7:7719744 1.13E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0799 K00799 - csv:101220995 418.313