Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0802 ATGGGATGGTTTCTCTGTTCTGGAAGTTCAAATAAGAAGGAAAAACAGCAGCAGCAGCTTCACAAGAAGGACGACAATCCGATCCCATCCACTTCAGAAAAATTGATGGTAAAGGCGACATTTAATGGGAAGAACGAGGCTCTAAAAGATGGAGGTTCTGATCAGATTTCAGCACAAACAATTACGTTCTCATTCCGAGAGTTGGCAGCTGCGACAAAGTATTTTAGAGCAGACTGTCTTTTAGGTGAAGGAGGTTTTGGTCAAGTATATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGAAACTTGATCAAAATGGGCTACAAGGAAACAGGGAATTCCTCGTTGAAGTACTGATGTTAAGCCTACTCCATCATCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGCGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCCTTGGAAGACCATCTACATGATCTCCCACCCGATAAAAAACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGCTTAGAATATTTGCATGACAAAGCTAACCCCCCAGTTATTTATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTCTCCGATTTTGGCTTGGCAAAATTGGGCCCTGTGGGGGATAACACTCATGTGTCCACAAGGGTGATGGGAACTTATGGATATTGTGCTCCTGAATATGCAATGACTGGCCAACTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTACTTGAAATTATTACCGGCAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCATATCCCTTATTTAAAGACAGAAGAAAGTTTTCGCAGATGGCTGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATACCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTCGTCACAGCCCTTACATATCTTGCCTCCCAAAAATATGATCCCGAAACCCAGCCAGTTCAAAGCGCTCGCAGTAGCTCATCCACACCTAGATCTTCTAGAAGAGAACTGTGA 1146 42.76 MGWFLCSGSSNKKEKQQQQLHKKDDNPIPSTSEKLMVKATFNGKNEALKDGGSDQISAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKKLDQNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAYPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALTYLASQKYDPETQPVQSARSSSSTPRSSRREL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7768612 7773745 + Maker00009887 Lcy7g0802 637634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0802 381 Pfam Protein tyrosine and serine/threonine kinase 79 348 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0802 381 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524(InterPro)
Lcy7g0802 381 CDD STKc_IRAK 81 350 - -
Lcy7g0802 381 MobiDBLite consensus disorder prediction 15 29 - -
Lcy7g0802 381 SUPERFAMILY Protein kinase-like (PK-like) 58 363 IPR011009 -
Lcy7g0802 381 SMART serkin_6 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0802 381 Gene3D Phosphorylase Kinase; domain 1 33 151 - -
Lcy7g0802 381 MobiDBLite consensus disorder prediction 359 381 - -
Lcy7g0802 381 MobiDBLite consensus disorder prediction 359 374 - -
Lcy7g0802 381 FunFam Serine/threonine-protein kinase PBS1 152 367 - -
Lcy7g0802 381 PANTHER OS07G0668900 PROTEIN 15 373 - -
Lcy7g0802 381 MobiDBLite consensus disorder prediction 1 30 - -
Lcy7g0802 381 Gene3D Transferase(Phosphotransferase) domain 1 152 373 - -
Lcy7g0802 381 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g0802 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g0802 381 FunFam Serine/threonine-protein kinase PBS1 46 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0271 Lcy-Chr11:3997190 Lcy7g0802 Lcy-Chr7:7768612 2.00E-182 dispersed
Lcy7g0802 Lcy-Chr7:7768612 Lcy8g1861 Lcy-Chr8:44913548 4.06E-159 dispersed
Lcy11g1440 Lcy-Chr11:38327813 Lcy7g0802 Lcy-Chr7:7768612 4.89E-181 transposed
Lcy3g1489 Lcy-Chr3:41721369 Lcy7g0802 Lcy-Chr7:7768612 3.30E-184 transposed
Lcy5g0251 Lcy-Chr5:2372887 Lcy7g0802 Lcy-Chr7:7768612 1.18E-202 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66080 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0802 - - - 0.0