Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0815 ATGGCTTACGTGGCCAAATGTACGAACTCTTCACCGACGCCGATCACTCTTCCAAACCCCTTATCTTACTCTCCCTCTTCTTCCTCCGCCGCCGCCGCCGCCAATTTTGCTTCGCCGCCCACTTCTCAGCCGTCGTCGCCGCCGCCTGCGGTGGTGCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGCGTTTTGGCTCCTTATTTCCCGCCGACGGAGCCCCTCAAGTTCACCATTGCTCATAGAGTATTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAACTTCCTGAATCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAACGCACGTTTGCGAGATCCAGTGTATGGTAGCGCAGGCGCGATATGCCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCAAGAGCGGAGGTAGCCAATATGCAACAACAACAAGCCAACTTATTGGCCTTGATTTGCATGGAAATGAGGCAATCACCGGAGCCCGTTTGGCCACCGCAACTCGTCGACACTACTTGCTTTCTCGACGACGCCACGCTTAGCTCGCCGTGGGAGCCGCTCTGGACGTGA 621 55.56 MAYVAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7965904 7967972 + Maker00010102 Lcy7g0815 637647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0815 206 Coils Coil 134 168 - -
Lcy7g0815 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 54 164 - -
Lcy7g0815 206 Pfam Lateral organ boundaries (LOB) domain 55 152 IPR004883 -
Lcy7g0815 206 ProSiteProfiles LOB domain profile. 54 155 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0815 Lcy-Chr7:7965904 Lcy8g1878 Lcy-Chr8:45098791 1.61E-63 dispersed
Lcy10g1785 Lcy-Chr10:42215302 Lcy7g0815 Lcy-Chr7:7965904 3.63E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20421 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0815 - - - 0.0