Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0833 ATGTCAAATTCCGAAACAGTCAACACCAATGGCGTCTCCAATGGCGCCTCCATCGACACCCACAAGAATCAGTCCTCTGCAAACGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGTATCCGTATGCCCATCATCTGCGCCGCCCGTGTCTTCCAGCTGACTCGCGAACTCGGTCATAAATCCGACGGCCAAACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCTTCCATTATCGCCGCAACCGGCACCGGCACCACTCCCGCTAATTTCTCCTCCGTCTCTCTCTCCGTCAGAGGAAATGGCGGCTCCGCCTCTCTCTCTTCCCCTTCCTCCACTACCTCAACTCTCTCCCTCTCTCGCCCCCACGCTCTGTCTAGCCCCACGCCGTTTATCCTCGGCAAGCGCGTCCGCGCCGACGACGACAGTAAGGACGATGGCTTGGGAGTGGGTCCGGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGCCAGGTGTGGAGCTTTGCCGCCGCCGCGGCAGCGGCGGCTCCGTCTGAGATGGTGGTTCAACAGGGGATTTCTCAGCAGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGCGGTGGTTCCGGGCGGCGGGAAGATGACCCTCGCTGA 783 62.32 MSNSETVNTNGVSNGASIDTHKNQSSANGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPHALSSPTPFILGKRVRADDDSKDDGLGVGPAVGSIVGPTGPSGYWAIPARPDYGQVWSFAAAAAAAAPSEMVVQQGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8212236 8213018 + Maker00009831 Lcy7g0833 637665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0833 260 Pfam TCP family transcription factor 38 121 IPR017887 -
Lcy7g0833 260 MobiDBLite consensus disorder prediction 113 135 - -
Lcy7g0833 260 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 157 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
Lcy7g0833 260 MobiDBLite consensus disorder prediction 1 31 - -
Lcy7g0833 260 MobiDBLite consensus disorder prediction 35 49 - -
Lcy7g0833 260 MobiDBLite consensus disorder prediction 1 49 - -
Lcy7g0833 260 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1073 Lcy-Chr10:32925040 Lcy7g0833 Lcy-Chr7:8212236 4.56E-93 dispersed
Lcy5g2557 Lcy-Chr5:48286621 Lcy7g0833 Lcy-Chr7:8212236 3.10E-33 dispersed
Lcy6g0204 Lcy-Chr6:1832793 Lcy7g0833 Lcy-Chr7:8212236 6.29E-27 dispersed
Lcy7g0833 Lcy-Chr7:8212236 Lcy8g1921 Lcy-Chr8:45480176 6.75E-25 dispersed
Lcy7g0833 Lcy-Chr7:8212236 Lcy2g0580 Lcy-Chr2:4966705 1.17E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20422 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0833 K16221 - csv:101206050 397.897