Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0839 ATGGTTCTCGAAGTTGCGGTCAAGGCTGCCGTTGGCGCCCCCGATGTGATCGGGGACTGCCCTTTCAGCCAAAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTGCTTACAAGAGGCATCTCATCAATCTCTCTGACAAACCCAGTTGGTTCTTGGAAGTGAACCCTGAAGGGAAGGTGCCGGTTGTGAAGTTTGATGATAAATGGGTTTCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCGCTTGTTACTCCTCCTGAAGTTTCTTCTGTGGGATCAAAGATATTTGGTGCTTTTGTAACATTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGAAGGCTTTCCTTGAAGAGTTGAAGGCGCTCAATGAGCATCTTAAGGCTCATGGTCCTTACGTCGCTGGACAGAAGGTAACTGCTGTTGATTTGAGTTTGGCACCAAAGTTGTACCATGTTGATGTTGCTCTTGGCCATTTTAAGAAGTGGGCTATCCCCAAAGACTTAGCCAGTTTAATCACCTACAAAGAGTTGCTTTTCGCTCGAGAATCTTTCGTAAAGACGAAGGCTGCCCCGAAACATGTAATTGCTGGATGGGAGCCCAAGGTGAATCCTGCATGA 642 46.57 MVLEVAVKAAVGAPDVIGDCPFSQRVLLTLEEKKVAYKRHLINLSDKPSWFLEVNPEGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVTPPEVSSVGSKIFGAFVTFLKSKDPNDGSEKAFLEELKALNEHLKAHGPYVAGQKVTAVDLSLAPKLYHVDVALGHFKKWAIPKDLASLITYKELLFARESFVKTKAAPKHVIAGWEPKVNPA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8278948 8282008 + Maker00009718 Lcy7g0839 637671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0839 213 SFLD Main (cytGST) 19 166 - -
Lcy7g0839 213 CDD GST_N_family 20 77 - -
Lcy7g0839 213 Gene3D Glutaredoxin 1 89 - -
Lcy7g0839 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Lcy7g0839 213 SFLD Glutathione Transferase (cytosolic) 19 166 IPR040079 -
Lcy7g0839 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Lcy7g0839 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Lcy7g0839 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Lcy7g0839 213 Gene3D - 90 212 - -
Lcy7g0839 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Lcy7g0839 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 209 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Lcy7g0839 213 SUPERFAMILY GST C-terminal domain-like 84 211 IPR036282 -
Lcy7g0839 213 Pfam Glutathione S-transferase, C-terminal domain 119 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0185 Lcy-Chr12:2281418 Lcy7g0839 Lcy-Chr7:8278948 2.22E-93 dispersed
Lcy5g1378 Lcy-Chr5:32972912 Lcy7g0839 Lcy-Chr7:8278948 8.95E-67 dispersed
Lcy7g0839 Lcy-Chr7:8278948 Lcy13g1039 Lcy-Chr13:22711472 3.86E-34 dispersed
Lcy7g0839 Lcy-Chr7:8278948 Lcy7g0840 Lcy-Chr7:8287498 2.78E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0839 K21888 - csv:101203666 372.089