Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0844 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCCGCGGTGCAGCTTTCTGGTGGCAGTCGCAAATTGTTCTGGCGTTCGGCCTCATGGTCTGCGTCACGTTCCTCCCTTCACCATCCCGAAGTGAACAAAGATGGTGGAGACCCGAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATCTTCCCCGCTCCATTGACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTGCAGCCTTTGTCGATAGCCCGGCGAAGCTTAGATGAATGGCCAAAGGCGGGGTCGGACGATATAGGCGAGTGGCCACAACCTCCTACTCCAAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCAACAATTCAGAGGAACCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGCTCAAAAGTGGCGGAACATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATCACTCATGTGTTGAATTGTGTAGGTTTCGTTTGCCCGGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTATGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGACGTTTTTGACTATTTTGAAGATGTTAGAGAACAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCTCGGTCCACGTCATTGGTGATTGCCTATCTGATGTGGAGAGAAGGACAGAGTTTTGACGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATCGCTGACCCGAATATGGGTTTTGCTTGCCAGTTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGAATGTATAGAGTTGCCCCACACTCACCATATGATCCTTTGCATCTGGTCCCCAAAATGTTGAATGATCCTTCACCCTCTGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCTATATTTGTTTGGATCGGTAAGAACTGTGAAGCAATCATGGAAAGGGATGCAAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTGTTACCTCTAATGGATAAATCTAACAGTAAAATAAATCTTGGGGAATTAAAAGGTAAGCCTTCTCCAGGCGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTCCAGAAGGCTATTACTGGTGGTTTTGTTCCTCCATTTCCTTCGTCTGAGAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGGAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCTCTCTCTAGGGTCTATTCAGACTCGTTGATGATGGTGCATTTTTCTGCAAAGTCTTCATCGCCTTCAGCATTTTCTTTGTCTTCATCATCTTCTTCACCCATCTATCTTTCTCCAGACTCCCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCCTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAATTTCTTCATCTCTGTCTAGTTTTTCAAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGCCCAATGGTCCAGAAACTCGTGATGCTGTCCCTCTGGAATCAAGTTCTAGCTCATTCTCATTCCCATCCAAAAAGTTCTCACCTTCACTTGCAGAACGCCGAGGTAGTGCAAAATCTCTGACATTGCCTACAATGCCTAGTAAAATCCGAGCAACAAATAGTGCCTCAAGGTTTCTTGCCACTCAAGAAGATGGTAAGAGGAAAAACAAGATTTCCTGCTCTCTTAATGTATCATCAATTAATATGAAAAATGGCTCAGAACCTATGGATAGGGTTGTAAATGAACAGACAAGTTCCACTCAGAATTTCAAGAATATCGAAAATGGTATGGATGTAAGGGTAGGCAGTGTGGCCTCATGCCAGCAGGAAACTAAAGTTGATGGACAATCTGCTAGTTCATGGAAAGGCTATCCCAAACCTTTTGAAGAAGACATGGTGTCCACTGTGTCAAATGGGAAGCAAGATGATGAGTTTGTCCAACCTATGGTATACTGTTGGCCAGAGTTGGAAAAGATTGCAGCTTTTGACTCAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTACCTCAGGTTCAAGTAAAGAGGGATAAAGACTTGGTTGATTTAGAAAAGATAGACTGGATTAAAGTTGGTCAATATGTACTTACTGAAATAGGTCTGCCGGAAAATACAGAAATTAAGATCATTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG 2568 42.76 MVGSEEDSGTSGAAVQLSGGSRKLFWRSASWSASRSSLHHPEVNKDGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKINLGELKGKPSPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMKEFVSAPRISLSRVYSDSLMMVHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSSSKYFSESSLDSPSASSPSVPISSSLSSFSNMSLISSNSSLESVPNGPETRDAVPLESSSSSFSFPSKKFSPSLAERRGSAKSLTLPTMPSKIRATNSASRFLATQEDGKRKNKISCSLNVSSINMKNGSEPMDRVVNEQTSSTQNFKNIENGMDVRVGSVASCQQETKVDGQSASSWKGYPKPFEEDMVSTVSNGKQDDEFVQPMVYCWPELEKIAAFDSSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLPQVQVKRDKDLVDLEKIDWIKVGQYVLTEIGLPENTEIKIIKEGEETEEFLARLSLL 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8374626 8380981 + Maker00009630 Lcy7g0844 637676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0844 855 Gene3D Severin 304 399 IPR029006 -
Lcy7g0844 855 MobiDBLite consensus disorder prediction 577 627 - -
Lcy7g0844 855 PANTHER MKPA PROTEIN 14 850 - -
Lcy7g0844 855 MobiDBLite consensus disorder prediction 33 70 - -
Lcy7g0844 855 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0016311(InterPro)
Lcy7g0844 855 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Lcy7g0844 855 CDD DSP 154 288 - -
Lcy7g0844 855 Gene3D Protein tyrosine phosphatase superfamily 140 295 IPR029021 -
Lcy7g0844 855 MobiDBLite consensus disorder prediction 100 120 - -
Lcy7g0844 855 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470(InterPro)
Lcy7g0844 855 MobiDBLite consensus disorder prediction 592 608 - -
Lcy7g0844 855 SMART VILL_6 302 399 IPR007122 GO:0051015(InterPro)
Lcy7g0844 855 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311(InterPro)
Lcy7g0844 855 SMART dsp_5 153 292 IPR020422 GO:0006470(InterPro)
Lcy7g0844 855 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311(InterPro)
Lcy7g0844 855 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 294 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0134 Lcy-Chr7:1234726 Lcy7g0844 Lcy-Chr7:8374626 2.01E-187 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0844 - - - 0.0