Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0867 ATGGAGGGTTTTGCGAGGTTTTTTGGTTTGGCAAAGCCATATTTGGGAGTTGTTTTTGTGCAGTTTGGTGCTGCTGGAATGGCGATTCTTGCAAAGTTGGCTATGGACAAAGGGATGAGCCAACATGTTTTTGTGGCTTATCGTCAAGCTGTTGCTATTCTTGTCATTGCTCCTTTTGCCATTGTCTTCGACAGGAAAGTGAGGACGAAGAAGATGACCTTTTCATTGTTCTTGAAGATTGTGATGCTGGGTTTATTAGAGCCGGTGATCGATCAGAACTTGTTCCTTACTGGTATGAAGCTCACAACAGCAACCTTTGCAGGTGCCATGTGCAATGTTGTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGAAAGCCAAGCAAAAATCCTAGGAACCATAGTGACAATTGGAGGAGCCATGGTTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAACCCAGCCAGCCCTCTGCTTCTTCAGGTGGTTCTGCACATCACCAAAGCCCACTCAAGGGCTCCCTCATGATTGCAACTGGCTGCATTGCCTGGTCAGCTTTCATCATTCTTCAGGCGACCACATTGAAAGTGTACCCAGCGGAGTTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAAACTCTGTTGTGGCTTTGATCGTGGACAAGGGGAACCCTGCTGCTTGGTCCTTGCACTTTGACACACAGCTTCTGGCTGTGGTTTATACTGGAGTAATATGTTCAGGGGTAGCATATTATGTTCAAGGGGTGGTGATGCAAACAAAAGGACCTGTTTTTGTTACTGCATTCTTTCCTCTAAGCATGATTATTATTGCAATCATGAGCTCCTTCATCTTGTCTGAGATAATGTTCTTGGGCAGTATTATTGGAGCAGTGACCATAATCATTGGCTTGTACCTGGTTTTGTGGGGCAAAAGCAAAGATCAACTTTCAGTTAAATTAGGCTGTGACAACATAACACCTGGTGATCAACAAATGACTGTAAAGGATGAGGCTTCGACGACAGTTCGATCAAATGAAGAATCTGTGGTGCTTGATGTTGCCAAAGAGGAGACGAATTGA 1134 44.89 MEGFARFFGLAKPYLGVVFVQFGAAGMAILAKLAMDKGMSQHVFVAYRQAVAILVIAPFAIVFDRKVRTKKMTFSLFLKIVMLGLLEPVIDQNLFLTGMKLTTATFAGAMCNVVPAFAFLMAWACRLEKVNILKRESQAKILGTIVTIGGAMVMTFIRGPMLNLPWTKPSQPSASSGGSAHHQSPLKGSLMIATGCIAWSAFIILQATTLKVYPAELSLTALICLVGTIGNSVVALIVDKGNPAAWSLHFDTQLLAVVYTGVICSGVAYYVQGVVMQTKGPVFVTAFFPLSMIIIAIMSSFILSEIMFLGSIIGAVTIIIGLYLVLWGKSKDQLSVKLGCDNITPGDQQMTVKDEASTTVRSNEESVVLDVAKEETN 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8618701 8623202 - Maker00009744 Lcy7g0867 637699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0867 377 PANTHER WAT1-RELATED PROTEIN 17 348 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy7g0867 377 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Lcy7g0867 377 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020(InterPro)
Lcy7g0867 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Lcy7g0867 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0867 Lcy-Chr7:8618701 Lcy7g0874 Lcy-Chr7:8717703 9.69E-216 dispersed
Lcy7g0867 Lcy-Chr7:8618701 Lcy7g0868 Lcy-Chr7:8637554 5.22E-199 tandem
Lcy10g1819 Lcy-Chr10:42503278 Lcy7g0867 Lcy-Chr7:8618701 3.89E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0867 - - - 0.0