Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0868 ATGGAGGGTTTTGTGAGGTCTTTGGGTTTGGCAAAGCCATATCTGGGAGTTGTTTTTATGCAGTTTGGTTTTGCTGGAATGTCCATTCTTGCAAAGTCAGCTTTGGACAAGGGGATGAGCCAATATGTTTTTGTGGTTTATCGTCAAGCCGTTGCTACTCTTGTCATTACTCCTTTTGCCATCGTCTTTGACAGGCCGGTGATCGATCAGAATTTGTACTATACTGGCATGAAGTTCACAACAGCAACCTTTGCAACTGCCATGTGCAATGTTGTACCAGCTTTTGCTTTCCTCATGGCTTGGGTTTGCAGGCTTGAGAAAGTGAGCATTTTGAAAAGGGGAAGCCAAGCAAAAATTCTAGGAACCATAGTGACAGTAGGAGGAGCCATGATCATGACATTCATAAGAGGGCCAATGTTGAATCTGCCATGGACTAAACCCAACCAGCCCTCTGCTCCTTCAGGTGGTGCTGCACATCACCAAAGCCCAGTCAAGGGCTCCCTCATGATTGCAACTGGCTGCATTTGCTGGGCAGCTTTCATCACTCTTCAGGCGATTACATTGAAAGCGTACCCGGCGGAGTTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAGGTTCTGGGGTGGCTTTGATCATGGAGAGGGGGAACCCTTCTGCTTGGGCTTTGCACTTTGACAGTCAGCTTCTAGCTGTTGTTTATGCTGGAGTAATATGCTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAGACAAAAGGACCTGTGTTTGTCACTGCATTCAATCCTCTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATATTGTTCTTGGGCAGGATAATTGGAGCAGTGTCCATTATCATTGGCTTGTACTTGGTTTTGTGGGGCAAAAGCAAAGATCAAGTTTCAGTTAAATCAGACTGTGATAAGGTAACACCTTCTGAGCAGCAAATGGTCAGTGGAAAGGATGAGGTTTCGAAGACGGTTGAATCAAATGAAGAATTTGTGGTGATTGATGTTGCCAAAGAGGAGACAAATTGA 1071 45.38 MEGFVRSLGLAKPYLGVVFMQFGFAGMSILAKSALDKGMSQYVFVVYRQAVATLVITPFAIVFDRPVIDQNLYYTGMKFTTATFATAMCNVVPAFAFLMAWVCRLEKVSILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKPNQPSAPSGGAAHHQSPVKGSLMIATGCICWAAFITLQAITLKAYPAELSLTALICLVGTIGGSGVALIMERGNPSAWALHFDSQLLAVVYAGVICSGVTYYIQGVVMQTKGPVFVTAFNPLSMILVAIMSSFILSEILFLGRIIGAVSIIIGLYLVLWGKSKDQVSVKSDCDKVTPSEQQMVSGKDEVSKTVESNEEFVVIDVAKEETN 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8637554 8641096 - Maker00010031 Lcy7g0868 637700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0868 356 PANTHER WAT1-RELATED PROTEIN 17 322 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy7g0868 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 134 - -
Lcy7g0868 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 309 - -
Lcy7g0868 356 Pfam EamA-like transporter family 165 304 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1819 Lcy-Chr10:42503278 Lcy7g0868 Lcy-Chr7:8637554 2.17E-103 dispersed
Lcy10g1820 Lcy-Chr10:42530696 Lcy7g0868 Lcy-Chr7:8637554 4.39E-96 dispersed
Lcy10g1822 Lcy-Chr10:42562423 Lcy7g0868 Lcy-Chr7:8637554 1.19E-128 dispersed
Lcy1g1424 Lcy-Chr1:13795372 Lcy7g0868 Lcy-Chr7:8637554 3.07E-137 dispersed
Lcy7g0868 Lcy-Chr7:8637554 Lcy7g0874 Lcy-Chr7:8717703 2.20E-218 dispersed
Lcy7g0867 Lcy-Chr7:8618701 Lcy7g0868 Lcy-Chr7:8637554 5.22E-199 tandem
Lcy7g0868 Lcy-Chr7:8637554 Lcy7g0869 Lcy-Chr7:8656371 1.09E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0868 - - - 0.0