Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0869 ATGGTGACAGTAGGAGGAGCCATGATTATGACATTCATAAGAGGGCCCATGTTGAATCTGCCATGGACAAAACCCAACCAGCCCTCTGCTTCTTCAGGTGGTTCTGCAAATCACCAAAGCGCAGCCAAGGGCTCCCTCATGATTGCAACTGGCTGCCTTTGTTGGTCAGCTTTCTTCATTCTTCAGGCAATTACATTGAAAACGTACCCGGCGGAGTTGTCGCTTACGACATTGATCTGTTTGGTGGGCAGCATTGGAAACTTTGGGGTAGCTTTGATCATGGACAAGGGGAACCCTACTGCTTGGTCATTGCACTTTGACCGTCAGCTTCTGGCTGTTGTTTATGCTGGAGTAATATGTTCAGGGGTAACTTTTTATATTCAAGGAGTGGTGATGCAGACAAAAGGACCTGTGTTTGTCTCTGCATTCAATCCTTTGAGCATGGTTATTGTTGCAATCATGAGCTCTTTCATCTTGTCTGAGATAATGTTCTTGGGCAGGATTATTGGAGCAGTGGCCATTAGCGCTGGTTTGTACCTGGTTTTGTGGGGCAAAAGCAAAGATCAGTTTTCAGTTAAATCAAACTGTGATAAGATAACATCTTGTGAGCAACAAATGACTGAAAAAGATGAGGCTTCGAAGACAATTCAATCAAATGAAGAATTTGTGGCGTTTGATGTTGAAAAAGAGGAGACAAATCGATGA 705 43.83 MVTVGGAMIMTFIRGPMLNLPWTKPNQPSASSGGSANHQSAAKGSLMIATGCLCWSAFFILQAITLKTYPAELSLTTLICLVGSIGNFGVALIMDKGNPTAWSLHFDRQLLAVVYAGVICSGVTFYIQGVVMQTKGPVFVSAFNPLSMVIVAIMSSFILSEIMFLGRIIGAVAISAGLYLVLWGKSKDQFSVKSNCDKITSCEQQMTEKDEASKTIQSNEEFVAFDVEKEETNR 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8656371 8658499 - Maker00009574 Lcy7g0869 637701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0869 234 PANTHER WAT1-RELATED PROTEIN 1 203 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy7g0869 234 Pfam EamA-like transporter family 43 182 IPR000620 GO:0016020(InterPro)
Lcy7g0869 234 SUPERFAMILY Multidrug resistance efflux transporter EmrE 105 187 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0869 Lcy-Chr7:8656371 Lcy7g0874 Lcy-Chr7:8717703 1.11E-134 dispersed
Lcy7g0868 Lcy-Chr7:8637554 Lcy7g0869 Lcy-Chr7:8656371 1.09E-130 tandem
Lcy7g0869 Lcy-Chr7:8656371 Lcy7g0870 Lcy-Chr7:8678754 7.24E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0869 - - - 0.0