Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0870 ATGGAGGGTTTTGTGAAGTTTGTGGGTTTGGCTAAGCCATATGTGGGACTTGTTTTTGTGCAGTGTGGTTTTGCTGGAATGGCGATTATTGCAAAGTCAGCTTTGGACAAGGGAATGAGCCAATATGTCTTTGTGGCTTATCGTCAAGCTGTTGCTACTCTTATCATTGCTCCTTTTGCCATTGTCTTTGAGAGGAAAGTGAGGACGAAGATGACCTTTTCATTGTTCTTCAAGATTGTGATGATGGGCTTATTAGAGCCGGTGATCGATCAGGACTTGTACTATACTGGTATGAAGTTCACAACAGCAACCTTTGCAGCTGCCATGGGCAATGTTGTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAACCTTTTGAAAAGGGGAAGCCAAGCAAAAGTTCTAGGAACCATAGTGACAGTAGGAGGAGCCATGATCATGACATTCATAAAAGGGCCCATGTTGAATCTACCATGGACAAAACTCAGCCAGCCCTCGGCTACTTCTTCAGGTGTTGCTGCAAATCACCAAAGCCCAGTCAAGGGCTCCCTCATGATTGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCAATCTTCAGGCGATTACATTGAAAGCGTACCCGGCGGAGTTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAAGCTCTGGGGTGGCTTTGATCATGGACAGGGGAAACCCTGCTGCTTGGTCTTTGCACTTTGACAGTCAGCTTCTGGCTGTTGTTTATGCTGGAGTGATATGTTCAGGGGTAACTTTTTATATTCAAGGAGTGGTGATGCAGACAAAAGGACCAGTGTTTGTCACTGCATTTTGTCCTCTGAGCATGATTATTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATAATGTTCTTGGGCAGAATTATTGGAGCAGTGATCATTATCACTGGCTTGTACCTAGTTTTGTGGGGCAAAAGCAAAGATCAACTCTCAGTTAAATCATGTTGTGATAAGATAACACCTTCTGAGCAACAAATGACTGAAAAGGATGTTCAATCAAATAAAGAATTTGTGGTGCTTGATGTTGCCAAAGAGGAGGCAAATTGA 1119 44.41 MEGFVKFVGLAKPYVGLVFVQCGFAGMAIIAKSALDKGMSQYVFVAYRQAVATLIIAPFAIVFERKVRTKMTFSLFFKIVMMGLLEPVIDQDLYYTGMKFTTATFAAAMGNVVPAFAFLMAWACRLEKVNLLKRGSQAKVLGTIVTVGGAMIMTFIKGPMLNLPWTKLSQPSATSSGVAANHQSPVKGSLMIATGCICWSAFINLQAITLKAYPAELSLTALICLVGTIGSSGVALIMDRGNPAAWSLHFDSQLLAVVYAGVICSGVTFYIQGVVMQTKGPVFVTAFCPLSMIIVAIMSSFILSEIMFLGRIIGAVIIITGLYLVLWGKSKDQLSVKSCCDKITPSEQQMTEKDVQSNKEFVVLDVAKEEAN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8678754 8682626 - Maker00009569 Lcy7g0870 637702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0870 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Lcy7g0870 372 Pfam EamA-like transporter family 22 153 IPR000620 GO:0016020(InterPro)
Lcy7g0870 372 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Lcy7g0870 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
Lcy7g0870 372 PANTHER WAT1-RELATED PROTEIN 17 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0870 Lcy-Chr7:8678754 Lcy9g1576 Lcy-Chr9:40945254 4.31E-96 dispersed
Lcy7g0870 Lcy-Chr7:8678754 Lcy7g0874 Lcy-Chr7:8717703 4.55E-222 proximal
Lcy7g0869 Lcy-Chr7:8656371 Lcy7g0870 Lcy-Chr7:8678754 7.24E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0870 - - - 0.0