Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g0874 ATGGAGGGTTTTGTGAGGTTTTTTGGTTTTGCAAAGCCATATTTGGGAATTGTTTTTGTGCAGCTTGGTTTTGCTGGACTGGCCATTATTGCAAAGTCAGCTTTGGACAAGGGAATGAGCCAATATGTTTTCGCAACCTATCGTCAAGCTGTTGCTACTCTTGTCATTGCTCCTTTTGCCATCGTCTTTGACAGGAAAGTGAGGACGAAGATCACCTTTTCATTGTTCTTCAAGATTGTGATGCTGGGGTTAATAGAGCCAGTAATCGATCAAAATTTGTACTATGCTGGTATGAAGTTAACAACAGCAACCTTTACATCTGCCATGTGCAATGTTGTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAACATTTTGAAAAAGGGAAGCCAAGCAAAAATTCTTGGAACCATAGTGACAGTAGGAGGAGCCATGATCATGACATTCATAAGAGGGCCAATGTTGAATCTGCCATGGACTAAACCCAACCAGCCCTCTGCTTCTTCAGGCAGTGCTGCACATCACCAAAGCCCAGTCAAGGGCTCCCTCATGATTGCAACTGGCTGCATCTGCTGGGCAGCTTTCACCATTCTTCAGGCGATTACATTGAAAGCGTACCCGGCGGAGTTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAGGCGCTGGGGTGGCTTTGATCATGGAAAGGGGGAACCCTGCTGCTTGGTCTTTGCACTTTGACAATCAGCTTCTGGCTGTTGTTTATGCTGGAGTAATATGTTCAGGGGTAACTTTTTATATTCAAGGAATGGTGATGCAGACAAAAGGGCCTGTGTTTGTCACTGCATTCAATCCTTTGAGCATGGTTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATCATGTTCATGGGCAGGATTATTGGAGCAGTGTCCATTATCATTGGATTGTACTTGGTTTTGTGGGGCAAAAGCAAAGATCAACTTTCAGTTAAATCGGACTGTGAAAAGATAGCACCTTGTGAGCAAAAAATGACAGGAAAGGATGAGGCTTCGAAGACAGTTCAATCAAATGAAGAATTTGTGGTGCTTGATGTTGCCAAAAAGGAGACAAATTGA 1131 44.3 MEGFVRFFGFAKPYLGIVFVQLGFAGLAIIAKSALDKGMSQYVFATYRQAVATLVIAPFAIVFDRKVRTKITFSLFFKIVMLGLIEPVIDQNLYYAGMKLTTATFTSAMCNVVPAFAFLMAWACRLEKVNILKKGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKPNQPSASSGSAAHHQSPVKGSLMIATGCICWAAFTILQAITLKAYPAELSLTALICLVGTIGGAGVALIMERGNPAAWSLHFDNQLLAVVYAGVICSGVTFYIQGMVMQTKGPVFVTAFNPLSMVLVAIMSSFILSEIMFMGRIIGAVSIIIGLYLVLWGKSKDQLSVKSDCEKIAPCEQKMTGKDEASKTVQSNEEFVVLDVAKKETN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8717703 8723309 - Maker00009949 Lcy7g0874 637706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g0874 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Lcy7g0874 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Lcy7g0874 376 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
Lcy7g0874 376 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
Lcy7g0874 376 PANTHER WAT1-RELATED PROTEIN 16 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1823 Lcy-Chr10:42573989 Lcy7g0874 Lcy-Chr7:8717703 2.10E-131 dispersed
Lcy7g0867 Lcy-Chr7:8618701 Lcy7g0874 Lcy-Chr7:8717703 9.69E-216 dispersed
Lcy7g0868 Lcy-Chr7:8637554 Lcy7g0874 Lcy-Chr7:8717703 2.20E-218 dispersed
Lcy7g0869 Lcy-Chr7:8656371 Lcy7g0874 Lcy-Chr7:8717703 1.11E-134 dispersed
Lcy7g0874 Lcy-Chr7:8717703 Lcy9g1576 Lcy-Chr9:40945254 1.68E-99 dispersed
Lcy7g0870 Lcy-Chr7:8678754 Lcy7g0874 Lcy-Chr7:8717703 4.55E-222 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g0874 - - - 0.0