Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g0979 | ATGGCTTTCCTCTTCTTCCTCCTCCTCCTCTTCTCCTCTCTCTTCCTCTTCCTCCGCCCCGCCAGATTCCGGCGACTCCGCCTCCCGCCGGGAACCCTCGGCCTCCCCCTCATCGGCGAGACCCTCCAGCTCATCTCCGCCTACAAGACCGAGAACCCCGAGCCCTTCATCGACGAGCGGGTCCGCCGGTTCGGACCGGTCTTTACCACTCATTTGTTCGGCGAGCCGACGGTTTTCTCCGCCGATTGGGAGACGAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTCGAGTGTAGCTACCCCGGTTCGATCTCGAACCTGCTTGGGAAGCATTCTTTGTTGCTCATGAAAGGGAGTTTGCATAAGAGAATGCATTCCTTGACTATGAGCTTCGCCAATTCGTCGATCATTCGGGATCATCTTTTGGTCGATGTGGACCGGTTGATTCGGCTCAATTTGGAGTCTTGGACCGGCCGGATCTTCCTCATGGAGGAGGCCAAAAAGATAACATTTGAATTAGCAGTGAAGCAATTGATGAGCTTTGATCGGTGTCAATGGACTCAAAATCTCATGAAACAATATCTTCTTGTCATTGAAGGTTTTTTCACCGTCCCTCTCCCTCTCTTCTCCTCCACTTACCGTCGAGCCATTCAGGCGCGGAGGGAAGTGGCGGAACAATTGGGGACGGTGGTGAGACAGCGAAGAAAAGAGAGCGAAGGCGGAGCGAAGAAGAAGGACATGCTCGGCGCATTGCTCGCCGGAGAGGACGCCCTCTCCGACGAGCAAATAGTGGATTTCTTATTGGCTCTGTTGGTGGCGGGATATGAAACGACGTCAACCACCATGACGCTGGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACGAGCAAATCAAAGCAAGGAAGAAGGAATCAGACCAACTTCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGGATTTTTAGGAGGGCAATGAAAGATGTAAATATCAAAGGTTATACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCTCTTTTAATCCATGGAGATGGCAACAGAGTGGCTCGGGGTCGACGACGGTAAATGCATTTACACCGTTCGGAGGAGGTCCGAGGCTATGCCCTGGGTACGAGCTTGCCAGAGTAGAACTCTCTGTTTTCCTTCACCATCTTGTCACCCAATTCAGTTGGGTTCCTGCAGAAGAGGATAAGTTGTTATTTTTCCCTACAACAAGAACACAGAAGCGCTATCCTATCTATGTGACGCGTAAGAACGAAACTAGACAATGTAAAGACAGTCATCCATGA | 1431 | 50.03 | MAFLFFLLLLFSSLFLFLRPARFRRLRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCQWTQNLMKQYLLVIEGFFTVPLPLFSSTYRRAIQARREVAEQLGTVVRQRRKESEGGAKKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQLLQWNDYKSMPFTQCVVNETLRVANIISGIFRRAMKDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQQSGSGSTTVNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEEDKLLFFPTTRTQKRYPIYVTRKNETRQCKDSHP | 476 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 10142468 | 10149018 | + | Maker00028849 | Lcy7g0979 | 637811 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g0979 | 476 | PRINTS | P450 superfamily signature | 406 | 415 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | P450 superfamily signature | 331 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | P450 superfamily signature | 415 | 426 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | P450 superfamily signature | 274 | 291 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | Coils | Coil | 297 | 317 | - | - | |
| Lcy7g0979 | 476 | PANTHER | CYTOCHROME P450 26 | 27 | 440 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Lcy7g0979 | 476 | CDD | CYP90-like | 60 | 464 | - | - | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 415 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 283 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 330 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 405 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 263 | 280 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | PRINTS | E-class P450 group I signature | 370 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | FunFam | Cytochrome P450 90A1 | 18 | 465 | - | - | |
| Lcy7g0979 | 476 | SUPERFAMILY | Cytochrome P450 | 22 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | Gene3D | Cytochrome P450 | 18 | 465 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g0979 | 476 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 408 | 417 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy7g0979 | 476 | Pfam | Cytochrome P450 | 202 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy13g0159 | Lcy-Chr13:1628527 | Lcy7g0979 | Lcy-Chr7:10142468 | 3.60E-110 | dispersed | |
| Lcy3g2208 | Lcy-Chr3:48938655 | Lcy7g0979 | Lcy-Chr7:10142468 | 4.99E-91 | dispersed | |
| Lcy7g0979 | Lcy-Chr7:10142468 | Lcy9g2109 | Lcy-Chr9:45787319 | 5.74E-83 | dispersed | |
| Lcy3g1458 | Lcy-Chr3:41354181 | Lcy7g0979 | Lcy-Chr7:10142468 | 4.71E-83 | transposed | |
| Lcy6g0960 | Lcy-Chr6:9974545 | Lcy7g0979 | Lcy-Chr7:10142468 | 4.81E-119 | transposed | |
| Lcy6g1968 | Lcy-Chr6:41800985 | Lcy7g0979 | Lcy-Chr7:10142468 | 6.83E-89 | transposed | |
| Lcy4g0758 | Lcy-Chr4:9102198 | Lcy7g0979 | Lcy-Chr7:10142468 | 1.16E-69 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy7g0979 | K09588 | - | csv:101216594 | 836.639 |