Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1019 ATGGGTGGCAATTCGCCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGTATTTTTGCTCCCTATTTCCCCTCCGATGACCCCCACAAGTTTGCTATTGTTCATAAGGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAAGTGCAAGAGTGAGGGATCCAGTTTATGGCTGCGTAGGGGCAATTTCGTACTTACAAAACCAAGTCTCACAGCTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGACGACAAACCGCCGTCGTCTCTCCTACTCCCGCCGCCGTCTCCGCCGCCCTCCCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA 504 50.79 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCPQIHSDDKPPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10781412 10782780 + Maker00028837 Lcy7g1019 637851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1019 167 Coils Coil 85 105 - -
Lcy7g1019 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lcy7g1019 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lcy7g1019 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1019 Lcy-Chr7:10781412 Lcy8g1638 Lcy-Chr8:42979317 6.85E-57 dispersed
Lcy4g0786 Lcy-Chr4:9452814 Lcy7g1019 Lcy-Chr7:10781412 1.31E-55 wgd
Lcy7g1019 Lcy-Chr7:10781412 Lcy8g1716 Lcy-Chr8:43689938 1.31E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20432 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1019 - - - 0.0