Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1037 ATGGAGGAAATCGAAACCCCATTTGATTTCAACTCCTGTTGGAAATACCCACTTGGGGATTTTGTTGATTGGCTCTGTTTTTCTGCCAAGGAGGAGGAGGAGAAGTGGAGGATTTCGAGAAGAAACTCTCGTGGGTTTGTTTATTCTTCTTCTTCTTTTCTTCGTTTTGGATTGGTTCTGTTCTTTCTGGTGGTGAATTTGGTCTGTGTTCAGCCTGTTTTGAGTCAGGATTGGGATGGTGTGGTTGTGACTCAGGCTGATTTTCAATCCCTTGAGGCATTTAAGCAAGAACTTGATGATCCTAAAGGGTTTTTGAAGAGTTGGAATGATAGTGGATTTGGGGCTTGTTCTGGTGGATGGGTTGGGATTAAATGTGCTAAGGGACAGGTTATTGTAATACAGCTTCCATGGAAGGGATTGGGAGGTAGAATCACTGAGAAGATTGGCCAGCTTCAGGCTCTTAGGAAGCTAAGTTTACATGACAACTTGATTGGTGGATCAATCCCTTCTTCATTGGGGCTTCTTCCAAATCTTAGAGGGGTTCAGTTGTTCAATAATCGATTTTCGGGTTCGATCCCGGCATCGTTGGGGCTCTGTCCTCTGCTTCAAACTCTTCACATTAGTAACAATTTGCTCACTGGAACTATCCCTCCTAGTTTGGCTAACTCCACCAAGCTCTATTGGCTTAACTTGAGCTACAACTCGTTTTCGGGTCCGATCCCGACGAGTCTCGCTCGATCGGTGTCGCTTACTTTCCTTGCTCTTGAACACAACAATCTCTCAGGCAGCATTCCCGACTTTTGGGGCGGCGATGCCACCGGGCGAAACCGAGTGTTTCAGCTCAAGTCTTTGACTCTTGATGACAACCTTCTCTCAGGTACCATACCAACTTCTTTAAGCAAGTTAAGTGAGCTTCAAGTGGTTTCCCTTAGCCACAATAGGTTGAATGGTGGCATTCCTGAAGAAATCAGTAGGCTTTCTCTTCTCAAAACTTTGGATGTTTCTAACAATTTCCTTAATGGAAGTATGCCCCAAAGTTTTGATAGATTGAGAAATCTCTCTGTTCTCAACTTGAGTAGAAACAGATTCAATGGTCAAATCCCTGCTACTTTAGGGAACATTTCAACACTTACACAACTTGATTTATCTCAGAACAATCTAAGTGGAGAAATACCAGCTTCTCTTGCTGATTTGCAAGGTCTTCAATTCTTAAATGTCTCCTACAACAACCTTTCCGGTTCGGTTCCTCCGGCTCTTGCCGAAAAATTCAATGCAAGTTCCTTTGTTGGGAACATTCAGCTCTGTGGGTTCAGTGGTTCGACTCTGTGCCCGTCCCCAGCCCCTTCTCAAGAAGCTCCGGCTCCTCCACCGGAAAGTTCGGCTTCCCGACATCGGAAGTTAACTACTAAAGATATAATCCTCATAGCAGCAGGAGCCCTCCTCCTAGTATTGGTTATAGTTTTCTTTGTACTGCTTTGCTGCTTGATTAGAAAAAGGGCTGCTTCAAAAGGAAAGGATGGTGGTGAGGCTGCAGCAGCCGGGGCTGCACGGGCCGAGAAGGGCGTCCCTCCGACTAGCAGTGAAGTTGAAGCGGGAGGGGATGCTGGAGGAAAGCTCGTTCATTTCGACGGGCAAACGGTCTTCACAGCAGATGATCTTTTGTGTGCAACAGCAGAAATAATGGGAAAGAGTACTTATGGGACTGTTTACAAGGCCACATTGGAGGATGGAAATCAAGTTGCAGTTAAGAGACTGAGAGAGAAGATCACTAAGAGCCAGAAGGAATTTGAAGCAGAGGTCAACATACTTGGCAAGATCAGGCATCCAAATCTTCTAGCTTTGAGAGCTTATTACTTGGGACCTAAAGGAGAAAAGCTTCTCGTTTTCGATTACATGCCGAACGGGAGTCTCGCAGCGTTCCTGCACGCCCGTGGACCGGACACATCCATCGATTGGCCGACGAGGATGAAGATAGCTCAGGGTATGACTCGTGGCCTGTGTCACCTTCACGCGCACGAGAACAGCATCCATGGAAACCTAACATCCAGCAACATTCTACTTGATGAGTACATAAATGCTAAGATTGCAGATTTTGGCCTGTCAAGGTTGATGACTGCAGCTGCAAGCTCAAATGTGATAGCAACTGCAGGAGCACTCGGGTACCGAGCGCCAGAGCTCTCGAAACTGAAGAAAGCCAACACGAAAACCGACATTTACAGCCTTGGAGTGATCATATTGGAGCTCCTTACCGGGAAGTCCCCCGGTGAAGCCATGAACGGAGTCGATTTGCCACAATGGGTTGCATCGATTGTCAAAGAGGAGTGGACTAATGAAGTTTTCGATTTGGAGCTGATGAGGGATGCATCTACCATTGGAGATGAGTTGCTAAACACTCTGAAACTCGCTTTGCATTGTGTCGATCCTTCACCGTCGGCGAGGCCGGAAGTTCAACAAGTTCTGCAGCAACTGGAGGAGATTAGGCCAGAAACTGCTCCCAGTTCTGGGGATGATGGAGCAGGAGGAGGAGCCCCTTCAACAAGTGAGTGA 2547 46.8 MEEIETPFDFNSCWKYPLGDFVDWLCFSAKEEEEKWRISRRNSRGFVYSSSSFLRFGLVLFFLVVNLVCVQPVLSQDWDGVVVTQADFQSLEAFKQELDDPKGFLKSWNDSGFGACSGGWVGIKCAKGQVIVIQLPWKGLGGRITEKIGQLQALRKLSLHDNLIGGSIPSSLGLLPNLRGVQLFNNRFSGSIPASLGLCPLLQTLHISNNLLTGTIPPSLANSTKLYWLNLSYNSFSGPIPTSLARSVSLTFLALEHNNLSGSIPDFWGGDATGRNRVFQLKSLTLDDNLLSGTIPTSLSKLSELQVVSLSHNRLNGGIPEEISRLSLLKTLDVSNNFLNGSMPQSFDRLRNLSVLNLSRNRFNGQIPATLGNISTLTQLDLSQNNLSGEIPASLADLQGLQFLNVSYNNLSGSVPPALAEKFNASSFVGNIQLCGFSGSTLCPSPAPSQEAPAPPPESSASRHRKLTTKDIILIAAGALLLVLVIVFFVLLCCLIRKRAASKGKDGGEAAAAGAARAEKGVPPTSSEVEAGGDAGGKLVHFDGQTVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITKSQKEFEAEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPNGSLAAFLHARGPDTSIDWPTRMKIAQGMTRGLCHLHAHENSIHGNLTSSNILLDEYINAKIADFGLSRLMTAAASSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVIILELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDLELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPETAPSSGDDGAGGGAPSTSE 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11061369 11067569 - Maker00028667 Lcy7g1037 637869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1037 848 MobiDBLite consensus disorder prediction 514 533 - -
Lcy7g1037 848 Gene3D Ribonuclease Inhibitor 340 437 IPR032675 -
Lcy7g1037 848 SMART LRR_typ_2 302 325 IPR003591 -
Lcy7g1037 848 SMART LRR_typ_2 398 422 IPR003591 -
Lcy7g1037 848 SMART LRR_typ_2 151 175 IPR003591 -
Lcy7g1037 848 SMART LRR_typ_2 326 349 IPR003591 -
Lcy7g1037 848 SMART LRR_typ_2 350 374 IPR003591 -
Lcy7g1037 848 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 272 446 - -
Lcy7g1037 848 Gene3D Ribonuclease Inhibitor 234 339 IPR032675 -
Lcy7g1037 848 Gene3D Ribonuclease Inhibitor 83 233 IPR032675 -
Lcy7g1037 848 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 68 837 IPR052451 -
Lcy7g1037 848 CDD STKc_IRAK 561 826 - -
Lcy7g1037 848 SUPERFAMILY L domain-like 124 419 - -
Lcy7g1037 848 SUPERFAMILY Protein kinase-like (PK-like) 559 827 IPR011009 -
Lcy7g1037 848 Pfam Leucine rich repeat N-terminal domain 86 125 IPR013210 -
Lcy7g1037 848 Pfam Protein tyrosine and serine/threonine kinase 558 823 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g1037 848 Pfam Leucine Rich Repeat 154 173 IPR001611 GO:0005515(InterPro)
Lcy7g1037 848 MobiDBLite consensus disorder prediction 825 848 - -
Lcy7g1037 848 FunFam Leucine-rich repeat receptor-like protein kinase 540 631 - -
Lcy7g1037 848 Pfam Leucine rich repeat 280 337 IPR001611 GO:0005515(InterPro)
Lcy7g1037 848 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515(InterPro)
Lcy7g1037 848 Pfam Leucine rich repeat 351 411 IPR001611 GO:0005515(InterPro)
Lcy7g1037 848 Gene3D Transferase(Phosphotransferase) domain 1 633 837 - -
Lcy7g1037 848 ProSiteProfiles Protein kinase domain profile. 555 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g1037 848 Gene3D Phosphorylase Kinase; domain 1 561 632 - -
Lcy7g1037 848 FunFam Pollen receptor-like kinase 1 632 836 - -
Lcy7g1037 848 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 84 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1403 Lcy-Chr3:40628038 Lcy7g1037 Lcy-Chr7:11061369 2.85E-73 dispersed
Lcy5g1658 Lcy-Chr5:38770561 Lcy7g1037 Lcy-Chr7:11061369 1.33E-56 dispersed
Lcy6g0303 Lcy-Chr6:2818578 Lcy7g1037 Lcy-Chr7:11061369 1.99E-59 dispersed
Lcy7g1037 Lcy-Chr7:11061369 Lcy8g1684 Lcy-Chr8:43400948 4.08E-72 dispersed
Lcy7g1037 Lcy-Chr7:11061369 Lcy5g0069 Lcy-Chr5:797078 2.63E-188 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66083 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1037 - - - 0.0