Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1064 ATGGTCCACTCCACTGTCCATCAATCGGCCGTCTTCGTGGACGCTTCGTTTGTGTGGGACTGTTTTGGAAATACTGATGACGGGTTTTCTCTTGAAGATCGAGATAGAGAAGCTATGGATCTTGAGCACGGGAAGTGTTGGGATACTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGCGTCGTCTATGGAGATTTGAGCATCTCTCCTCTGTACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACCAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATTGTCCCCCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCATTAATTTGCAGACATGCCAAAGTAAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCACTTTCCACTTATTTGCTTGAACATCCACCAGAGAAGAAGAAGCAATCAAAGGTTAAATTGCTGCTGGAGAAACACAGGGCTCTGCATACTTCTTTGTTGATTCTTGTTCTTCTTGGGACTTGTATGGTGATTGGAGATGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCTCACCATCAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTTGGCTTTGTCTTTGCGCCCATTGTATTGACATGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACAATGGAATCCACATGTTTATCAGGCTCTTTCTCCTTATTACATGTTCAAGTTTCTGGAGAAGACAAGGAAGAGTGGTTGGATGTCGTTGGGCGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACCTTTCTGGTGTATCCAGCACTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACTATGCCACCAACAACATTGGCTTCTATGATTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTATAATTGCTATACTTGCTTCGGTTGTTGGAAGTCAAGCAATCATCAGCGGAACATTCTCCATTATAAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGAGTGAAGGTTGTTCATACCTCTGATAAGATCCATGGCCAGATCTACATTCCGGAGATCAATTGGGTACTTATGATTCTCTGTGTTGCGGTTACCATTGGATTTAGAGACATAAAACACCTCGGAAATGCATCAGGTCTAGCTGTGATGACTGTGATGCTTGTGACAACCTGTCTTACATCTTTGGTGATTGTTCTCTGTTGGAACAAATCTCCACTTTTGGCTCTCTCCTTTTTGGTCTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTCCTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTCGATCTTCACAACAAGGTTTCATTAGAATGGTTGCTTGCATTGGGGCCGAGCCTCGGGATTGCTCGCGTCCCAGGCATTGGATTAGTCTTCACTGATCTCACCTCTGGTATCCCTGCCAACTTCTCCCGGTTCGTCACTAACCTTCCGGCATTTCATCGCATCCTTGTCTTTGTGTGTATAAAGTCGGTACCAGTTCCTTTTGTACCTCCAGCAGAGCGATATCTTGTTGGAAGAGTAGGCCCGGCCACACATCGGTCATACCGGTGCATTGTTCGATATGGATACCGTGATGTTCACCAGGATGTGGACTCATTTGAATCTGAATTAGTCAAGAAACTGGCAGACTTCATCCGGTACGATTGGTACAGAAAGCAAAGAGGCAACTCTTGCAGCGAGGACGATGCATCCCGTTCAAATGAATCGACAAGCGAGCACAGGCTAGCTGTGATCGGAACAGTAGAATTTGCAGGCGCAAGTGCTAACGAGGAGACTGTGCAGCCTGCGAGTGCATCAGTCGGGTTCCAAACTGTAGACAGCATCACCGATGTGATCGAAATGGAGCCACTGGGAGAAGAAAGAAGAGTCAGGTTCGCCATAGATGACGATTTCGAAGGTGACTCACAAGCTGAAACAGAAGCCCTTCTGCACGAAGAGCTAGAAGATCTTGTAGCGGCTCAGCAATCAGGGACGGCTTTCATTCTCGGCCATTCCCACGTCCGGGCAAAACAGGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTTCAACTTCCTGAGAAGGAACTGCAGAGGCGCAGACGTTGCTCTTAAGGTGCCACCAGTATCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2487 45.76 MVHSTVHQSAVFVDASFVWDCFGNTDDGFSLEDRDREAMDLEHGKCWDTSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTSLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLTWLLCISTLGIYNIIQWNPHVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHYATNNIGFYDSVPESVRWPVLIIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWVLMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLVFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVKKLADFIRYDWYRKQRGNSCSEDDASRSNESTSEHRLAVIGTVEFAGASANEETVQPASASVGFQTVDSITDVIEMEPLGEERRVRFAIDDDFEGDSQAETEALLHEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGFNFLRRNCRGADVALKVPPVSLLEVGMVYVV 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11363119 11369850 - Maker00028699 Lcy7g1064 637896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1064 828 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 49 827 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy7g1064 828 Pfam K+ potassium transporter C-terminal domain 565 826 IPR053952 -
Lcy7g1064 828 NCBIfam potassium uptake protein 61 827 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy7g1064 828 Pfam K+ potassium transporter integral membrane domain 61 553 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0078 Lcy-Chr11:795800 Lcy7g1064 Lcy-Chr7:11363119 6.59E-272 dispersed
Lcy3g1708 Lcy-Chr3:44390324 Lcy7g1064 Lcy-Chr7:11363119 1.53E-192 dispersed
Lcy3g1709 Lcy-Chr3:44404725 Lcy7g1064 Lcy-Chr7:11363119 1.63E-196 dispersed
Lcy5g2068 Lcy-Chr5:43789806 Lcy7g1064 Lcy-Chr7:11363119 1.80E-163 dispersed
Lcy6g0363 Lcy-Chr6:3339127 Lcy7g1064 Lcy-Chr7:11363119 1.18E-153 dispersed
Lcy6g1808 Lcy-Chr6:37052524 Lcy7g1064 Lcy-Chr7:11363119 1.50E-35 dispersed
Lcy7g0195 Lcy-Chr7:1702649 Lcy7g1064 Lcy-Chr7:11363119 0 dispersed
Lcy7g1064 Lcy-Chr7:11363119 Lcy10g1936 Lcy-Chr10:43445714 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1064 K03549 - csv:101211022 1504.19