Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy7g1100 | ATGGAGGGGGCTCTACTTGATGGTTTGGTGTCGATTTTTCCGGCGGGGGTTGCGATGGCGGTGGTGGCAGTATTGGTCCATTTCTACTATGGGGTGTGGAGAAGAACGGCGGAGGTGAGGAGGAAACTTGGAGCGCAGGGGGTGACGGGACCGCCACCGTCGTCGGCTCTTTTTGGAAACTTGCCAGAGATGAAGGAGATCGAGTTGCAGGCGGCGGCCATGGCTTCTCCGCCGCATCATCCGTCGCCAACTGTGGCTCATGATTATATCTCCACCCTCTTTCCCTATTTCGTCAAGTGGAGGAAGCAATACGGCCCATTGTACACTTATTCAACAGGGACGAGGCAGCATCTGTACGCCAACGATGTGGATCTGGTGAAGGACTTGAGCCTCTCCAAGAATCCCGACCTGGACAAGCCATCCTACATCTTCAAGAAGTTCGCGCCGCTCCTCGGCTACGGCGTCATCCTGTCCAATGGCGCCGACTGGACGCTGCAGCACAAGATCATCGCGCCGGAGTTCTTCATGGACCGGGTCCGGGGCATGGCGGCTCTGATGGTGGAGGCGGCGGCGCCGATGCTGGAGAAATGGGAGGGCAGGATCGGAGAAGAAGGAGAGGGAGCGGCGGCGGAGATTGAGGTGGAAGAGGGTCTGAGAGGATTCTCGGCGGATGTGATTTCCAGGGCTTGCTTTGGGAGCTCCTATGAGAAGGGGAAGCAGATTTTTTCAAAGCTTAGGGATCTTCAGAAGTTGATCAGCGACGGAAACCCTCTGTTTCGCTCTTCTTTCAGTGACAGATTTTTTCAACCAAGCAAACACAGAAGAATAAAAAAGCTGGAGAAGGAGATCGAGTCATTGATATGGGAGACGGTTCAACAACGGCAAGAAGAATGCTCCAAAACGTCGTCGTCGGAGAAGGATCTGTTACAGGTTTTAATGGAAGGCGCCATGAACGACCCAACTATAGGAGCTTGCAATGAGTCCTGCAAGAAGTTCATCGTTGACAACTGCAAGACCATGTACTTTGCCGGCCATGAGTCCTCCGCGGCCACCGCCACTTGGGCCTTAATGCTCCTTGCCCTCCACCCCGAATGGCAAGATCGTATCCGCTCTGAGTTCACTCAAGCTTGCCCCGATGGTCGCCTCGACACGACCGCGATCTCTCAACTCAAATCGCTGAGTATGGTGGTTCAAGAAACGTTGCGGCTATACCCACCTGGGGCATACGTGGCAAGGGAGACATTTGCTGAGACACGACTTGGGAACGTGGTGGTTCCGAAGGGCGTCTGTCTATGGACTTTGATTCCAATGTTGCACACAGAAGTAGAAATATGGGGAGAAGATGCAAATGAGTTCAAGCCAGAGCGATTCGCCAATGGCATAGCCAAGGCCTGCAAGTTTCCTCAGGCCTACTTGCCATTTGGGGCAGGTCATCGGACCTGCTTAGGGAAGAACTTTGCATTGGTTCAATTGAAAATTATCATTTCTCTGGTAGTTTCCAAGTTTAGATTTTCACTATCTCCTGAGTATCGTCATTCTCCTTCTTATAGAATAATTGTGGAGCCTGACGATGGTGTGAAGATTGTCTTCCAAAGGCTTTGA | 1602 | 52.5 | MEGALLDGLVSIFPAGVAMAVVAVLVHFYYGVWRRTAEVRRKLGAQGVTGPPPSSALFGNLPEMKEIELQAAAMASPPHHPSPTVAHDYISTLFPYFVKWRKQYGPLYTYSTGTRQHLYANDVDLVKDLSLSKNPDLDKPSYIFKKFAPLLGYGVILSNGADWTLQHKIIAPEFFMDRVRGMAALMVEAAAPMLEKWEGRIGEEGEGAAAEIEVEEGLRGFSADVISRACFGSSYEKGKQIFSKLRDLQKLISDGNPLFRSSFSDRFFQPSKHRRIKKLEKEIESLIWETVQQRQEECSKTSSSEKDLLQVLMEGAMNDPTIGACNESCKKFIVDNCKTMYFAGHESSAATATWALMLLALHPEWQDRIRSEFTQACPDGRLDTTAISQLKSLSMVVQETLRLYPPGAYVARETFAETRLGNVVVPKGVCLWTLIPMLHTEVEIWGEDANEFKPERFANGIAKACKFPQAYLPFGAGHRTCLGKNFALVQLKIIISLVVSKFRFSLSPEYRHSPSYRIIVEPDDGVKIVFQRL | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 11903376 | 11909045 | - | Maker00028575 | Lcy7g1100 | 637932 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy7g1100 | 533 | Gene3D | Cytochrome P450 | 32 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | SUPERFAMILY | Cytochrome P450 | 77 | 531 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | Pfam | Cytochrome P450 | 93 | 517 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 221 | 239 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 352 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | E-class P450 group I signature | 332 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | P450 superfamily signature | 343 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | P450 superfamily signature | 395 | 406 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | P450 superfamily signature | 481 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PRINTS | P450 superfamily signature | 472 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy7g1100 | 533 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 25 | 524 | IPR050665 | GO:0004497(PANTHER) | |
| Lcy7g1100 | 533 | Coils | Coil | 276 | 296 | - | - | |
| Lcy7g1100 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 474 | 483 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy13g0504 | Lcy-Chr13:6195852 | Lcy7g1100 | Lcy-Chr7:11903376 | 6.82E-156 | dispersed | |
| Lcy6g0159 | Lcy-Chr6:1496189 | Lcy7g1100 | Lcy-Chr7:11903376 | 2.36E-95 | dispersed | |
| Lcy7g1100 | Lcy-Chr7:11903376 | Lcy9g0284 | Lcy-Chr9:7371433 | 6.26E-86 | dispersed | |
| Lcy7g1100 | Lcy-Chr7:11903376 | Lcy7g1103 | Lcy-Chr7:11965621 | 1.34e-313 | proximal | |
| Lcy10g2131 | Lcy-Chr10:45360102 | Lcy7g1100 | Lcy-Chr7:11903376 | 4.24E-103 | wgd | |
| Lcy12g1730 | Lcy-Chr12:38031963 | Lcy7g1100 | Lcy-Chr7:11903376 | 2.49E-17 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy7g1100 | K20661 | - | csv:101216582 | 789.645 |