Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1232 ATGTTTTATGGTTGTGTTCTAATAAATGAGCAAGCCATATATACAATGGGCTTTAGGGAAGTATGGGTGTTGTTGTCAATAATGCTTGCAACTTCAACTGCTGCTGTGGATCAACAGACATACATTATTCACATGGACACCACGAAGATGCCCACCACCAAACCTGGACAATGGTACATGGACATGATTGATTCCGTCAATAAAATCTCCTATCTAAACGAAGAAGAAGCATCGAATCCCGCCGAGATTCTCTATGTCTACAAAACTGCTATTTCGGGTTTTGCTGCCAAGCTCTCCACTAGAAAGCTTCATTCTTTAAGCAAAATCCCTGGCTTTCTTGCTGCCACCCCTGATGAACTACTACAGCTTCACATCACGCACTCCCCTCAGTTTCTTGGCCTACAAAAAGGCCATGGCCTTTGGAATTCTTCAAACTTGGGTTCTGATATAATTATTGGTGTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTTCAGGACAAGGGTCTGCCCCCAGTGCCTAAAAAGTGGAAAGGCATTTGTCAAGCAGGCCCAAAATTCTCACGCTCAAATTGTAACAGAAAACTCATTGGTGCAAGAACCTACATTAAAGGCTACGAGACCATCGTCGGTAAATTGAACGCAACGGGGACGTTTCGGTCGCCTCGAGACTCAGATGGGCATGGCACACACACGGCATCGACTGCTGCTGGAAATATTGTGTACAGAGCAAGCCTTTATAACCAAGGCATGGGAGTAGCCACCGGAATGGGGTTCAATTCAAGAATTGCGGCATATAAAGTATGCTGGCAGGAGGGATGCGCCAACACCGATATTCTGGCAGCCATAGACCGTGCCGTTGCCGATGGAGTCGATGTTCTGTCGCTCTCTTTGGGTGGTGGTGCCGGGTTTTTTGACAGAGATGGTATTGCCATAGCTGCATTTGGTGCAGTTCGAAAAGGGGTCTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTATCTCAACTGTTAGTAATGTTGCGCCATGGATCATGACAGTAGCTGCAAGCTACACTGATAGAACCTTCCCAGCCACTGTAAAGCTTGGAAATGGCCAAGTTTTTGAAGGCTCCTCTTTGTATTCTGGGAAGAGCATAAATCAACTCCCACTTGTTTATAACAATACTGCAGGTGGACAAGAAGCAAATGTTTGTACAGCCGGTTCACTGGTTCCATCAAAGGTGAAGGGCAAAATTGTGGTATGTGAAAGAGGAACAAACTCGAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGGATGATTGTGATCAACACACAACTTGAAGGGGAGGAGCTTTTGGCTGACCTTCATGTCTTACCAGCCACTGCTCTTGGATTTTCAGCTGGCAAAGCCATCATAAACTACATAGCTTCCTCAAAATATCAACCAAGAGCTTCAATCACATTCGAAGGGACCAAATTTGGAAGTCAAGCACCGAGAGTCGCTGCATTTTCTTCTCGAGGGCCGAGCCTCTTCAAACCGTACGTGATAAAGCCAGACATAACTGCACCTGGTGTTAATATATTGGCTGCTTGGCCACCCATTGCGAGCCCAACTGAGCTCGAGTCCGATAAAAGAAGAGTGTTGTTCAATATCATTTCAGGAACTTCTATGTCTTGTCCTCACGTAAGCGGCTTAGCTGCGCTGCTTAAATCCGCACACAAGGATTGGTCACCGGCTGCCATCAAATCTGCACTCATGACCACGGCTTACATTACTGACAACAAAATGAGTCTCATTCCCGATGCTGGCCGCGCTAGCAGTCGACCTGCGGACCCTTTTGCATATGGTTCGGGCCATGTTGATCCCGAGAAAGCGTCTGACCCGGGATTGATCTATGATATCGCGCCCCAAGACTACCTAAAGTACTTGTGTAGCTTGAACTACACTTCATCACAAGTTGCTTTAGTTTCAAGAGGGAATTTCACTTGTCCATCAAAAAGAAAACTTCTTAAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGCTCATGAAGAAGAAGGCCAAAAATGTTATTGTTACATTCAAGAGAACAGTGACAAATGTTGGTAGCCCAAGCAGTGATTACACTATTATAGTCAACAATCCAAAAGGAATAAGAGTTATTGTGAAGCCTGAGATGTTGAGTTTTAGAAGATTGGGACAGAAGTTGAGTTATCAAGTGAGTTTTGTTGCATTGGGAAAAGGAGAAGCTTTGAGTGACTTTTCTTTTGGATCTCTTATTTGGTTCTCAGGAAAATATGTTGTGAGAAGTCCTATAGCAGTGACCTGGCTAGAAGAAGAGGGTAATCTGGAAAGTATTTCATTTTAG 2370 44.81 MFYGCVLINEQAIYTMGFREVWVLLSIMLATSTAAVDQQTYIIHMDTTKMPTTKPGQWYMDMIDSVNKISYLNEEEASNPAEILYVYKTAISGFAAKLSTRKLHSLSKIPGFLAATPDELLQLHITHSPQFLGLQKGHGLWNSSNLGSDIIIGVLDTGIWPEHISFQDKGLPPVPKKWKGICQAGPKFSRSNCNRKLIGARTYIKGYETIVGKLNATGTFRSPRDSDGHGTHTASTAAGNIVYRASLYNQGMGVATGMGFNSRIAAYKVCWQEGCANTDILAAIDRAVADGVDVLSLSLGGGAGFFDRDGIAIAAFGAVRKGVFVSCSAGNSGPFISTVSNVAPWIMTVAASYTDRTFPATVKLGNGQVFEGSSLYSGKSINQLPLVYNNTAGGQEANVCTAGSLVPSKVKGKIVVCERGTNSRTEKGEQVKLAGGAGMIVINTQLEGEELLADLHVLPATALGFSAGKAIINYIASSKYQPRASITFEGTKFGSQAPRVAAFSSRGPSLFKPYVIKPDITAPGVNILAAWPPIASPTELESDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYITDNKMSLIPDAGRASSRPADPFAYGSGHVDPEKASDPGLIYDIAPQDYLKYLCSLNYTSSQVALVSRGNFTCPSKRKLLKPGDLNYPSFSVLMKKKAKNVIVTFKRTVTNVGSPSSDYTIIVNNPKGIRVIVKPEMLSFRRLGQKLSYQVSFVALGKGEALSDFSFGSLIWFSGKYVVRSPIAVTWLEEEGNLESISF 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15267859 15271621 - Maker00028827 Lcy7g1232 638064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1232 789 Gene3D Peptidase S8/S53 domain 149 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1232 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 124 IPR037045 -
Lcy7g1232 789 SUPERFAMILY PA domain 392 481 IPR046450 -
Lcy7g1232 789 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Lcy7g1232 789 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Lcy7g1232 789 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Lcy7g1232 789 CDD Peptidases_S8_3 121 590 IPR034197 -
Lcy7g1232 789 Pfam Fibronectin type-III domain 674 775 IPR041469 -
Lcy7g1232 789 SUPERFAMILY Subtilisin-like 123 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1232 789 CDD PA_subtilisin_like 361 486 - -
Lcy7g1232 789 FunFam Subtilisin-like protease SBT1.5 149 366 - -
Lcy7g1232 789 Pfam Subtilase family 147 618 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy7g1232 789 Gene3D - 643 778 - -
Lcy7g1232 789 ProSiteProfiles Serine proteases, subtilase domain profile. 131 626 - -
Lcy7g1232 789 FunFam subtilisin-like protease SBT1.5 355 493 - -
Lcy7g1232 789 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 152 163 IPR023827 -
Lcy7g1232 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 773 IPR045051 -
Lcy7g1232 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Lcy7g1232 789 FunFam Subtilisin-like protease SBT1.5 643 778 - -
Lcy7g1232 789 Gene3D - 355 493 - -
Lcy7g1232 789 Pfam PA domain 384 471 IPR003137 -
Lcy7g1232 789 Pfam Peptidase inhibitor I9 40 124 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1726 Lcy-Chr12:37985057 Lcy7g1232 Lcy-Chr7:15267859 1.24E-212 dispersed
Lcy7g1232 Lcy-Chr7:15267859 Lcy7g1235 Lcy-Chr7:15369649 0 dispersed
Lcy7g1232 Lcy-Chr7:15267859 Lcy7g1234 Lcy-Chr7:15321455 0 proximal
Lcy12g2078 Lcy-Chr12:42158737 Lcy7g1232 Lcy-Chr7:15267859 1.73E-222 transposed
Lcy5g1327 Lcy-Chr5:31636800 Lcy7g1232 Lcy-Chr7:15267859 2.43E-187 wgd
Lcy7g1232 Lcy-Chr7:15267859 Lcy9g0548 Lcy-Chr9:17151572 1.19E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1232 - - - 0.0