Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1234 CTTTCACAATTTCAGCATCTACCTGGTTCAGGCAAGCACACCATATATACAATGGGCTTTAGGGAAGTATGGTTGTTGTTGTCAATAGTGCTTGCAACTTCAACTGCTGCTTTGGATCAACAGACCTACATTATTCATATGGACACCACAAAGATGGCCACCACCAACCCTGAACAATGGTACGCATCTATGATTGATTCAGTCAATAAAATCTCATCTCTAGATGAAGAAGCATCAAATGCTGCTGAGATTCTTTACGTCTACAAAACTGCTATTTCAGGTTTTGCTGCCAAGCTCTCCACTAGAAAGCTTCATTCTTTAAGCAAAATCCCTGGCTTTCTGGCTGCCACTCCTGATGAGCTACTACAGCTTCACACCACGCACTCCCCTCAGTTTCTCGGCCTACAAAGGGGCCATGGCCTTTGGAATTCTTCAAACTTGGGTTCTGATATAATTATTGGTGTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTTCGGGACAAGGGTCTGCCCCCAGTGCCTAAAAAGTGGAAAGGCATTTGTCAAGCAGGCCCAAACTTCTCACGTTCAAATTGTAACAAAAAACTCGTTGGCGCAAGAGCCTACATTAAAGGCTACGAGGCCATCGTCGGTAGACTGAACGCAACGGGGACGTTTCGGTCGCCTAGAGACTCAGATGGGCATGGCACACACACGGCATCGACTGCTGCCGGAAATATTGTGTACAAAGCAAGCCTTTATAACCAAGGCATGGGAGTAGCCACCGGAATGCGGTTCACTTCAAGGATTGCAGCATATAAAGTATGTTGGCCACAAGGGTGCGCGAATGCCGATATTTTGGCAGCCATAGACCGTGCTGTTGTCGATGGAGTCGATGTTCTGTCGCTCTCTTTAGGCGGCGGTGCCAGTGCTTTTTACAGAGATGATATTGCCATAGCTACATTTGGTGCTGTTCGAAATGGGGTCTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTACCTCAACTGTCGGTAATGTAGCGCCATGGATCATGACAATCGCTGCAAGCTACACTGATAGAGCCTTTCCAGCCATGGTAAAGCTGGGAAATGGCCAAGTTCTTGAAGGCTCTTCTTTGTATTCTGGGAAGAACATAAATCAACTCCCACTTGTTTATAACAATACTGCAGGTGGACAAGAAGCAAATGTTTGTACAGCCGGTTCACTGGTTCCATCAAAGGTGAAGGGCAAAATTGTGGTATGTGAAAGAGGAACGAACTCGAGAACTGCAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGGATGATTCTGATCAACACACAACTTGAAGGGGAGGAGCTTTTTGCTGACCCTCATGTTTTACCAGCCACTACTCTTGGAGCTTCAGCTGGCAAAGCCATCATAAACTATATAGCTTCCTCAAAACATCAACCGAAAGCTTCGATCACATTCGAAGGTACCAAATATGGAAGTCGAGCACCGAGAGTGGCTGCGTTTTCTTCTCGAGGGCCGAGCATCGTCGGAGCAGACGTGATAAAGCCAGACATAACTGCACCTGGTGTTAATATATTAGCTGCTTGGCCACCCATTGTGAGCCCAAGTGAGCTTGAATCTGACAAAAGAAGAGTGTTGTTCAATATCGTTTCAGGAACTTCTATGTCTTGCCCTCATGTAAGCGGCTTAGCTGCGTTGCTTAAATCGGCGCACAAGGATTGGTCACCTGCTGCCATCAAATCTGCTCTCATGACCACAGCTTACACTAATGACAACAAAATGAGTCCCATTTCTGATGTTGGCTCTACGAACGGCAAGCCTGCAAACCCTTTTGCTTTCGGTTCCGGCCATGTCGATCCCGAGAATGCTTCCGATCCAGGGCTCATCTATGATATCACGCCCGAAGACTACCTAAACTACTTGTGTAGCTTGAACTATAATTCAACACAAATTGCTTTAGTTTCAAGAGGGAATTTCACTTGTCCATCAAAAAGAACATTTCTTCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGCGTTCATGAAGAAGAAGGCCAAAAATTTTACTGTTACATTCAAGAGAACAGTGACAAATGTTGGTAGCCCAAGGAGTGATTACACTGTTCAAATCAACAATCCTAAGGGAGTAACAATTATTGTGAAGCCAGAGAAGTTAAGTTTTAGGAGATTGGGAGAGAAGTTAAGTTACCAAGTGAGTTTTGTTGCATTGGGAAAAAGAGAAGCTTTGAGTGAATTTTCTTTTGGATCTCTGGTTTGGCTCTCAGGGAAATATGCTGTAAGAAGTCCTATAGCAGTCACTTGGCAGTAG 2340 45.17 LSQFQHLPGSGKHTIYTMGFREVWLLLSIVLATSTAALDQQTYIIHMDTTKMATTNPEQWYASMIDSVNKISSLDEEASNAAEILYVYKTAISGFAAKLSTRKLHSLSKIPGFLAATPDELLQLHTTHSPQFLGLQRGHGLWNSSNLGSDIIIGVLDTGIWPEHISFRDKGLPPVPKKWKGICQAGPNFSRSNCNKKLVGARAYIKGYEAIVGRLNATGTFRSPRDSDGHGTHTASTAAGNIVYKASLYNQGMGVATGMRFTSRIAAYKVCWPQGCANADILAAIDRAVVDGVDVLSLSLGGGASAFYRDDIAIATFGAVRNGVFVSCSAGNSGPFTSTVGNVAPWIMTIAASYTDRAFPAMVKLGNGQVLEGSSLYSGKNINQLPLVYNNTAGGQEANVCTAGSLVPSKVKGKIVVCERGTNSRTAKGEQVKLAGGAGMILINTQLEGEELFADPHVLPATTLGASAGKAIINYIASSKHQPKASITFEGTKYGSRAPRVAAFSSRGPSIVGADVIKPDITAPGVNILAAWPPIVSPSELESDKRRVLFNIVSGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYTNDNKMSPISDVGSTNGKPANPFAFGSGHVDPENASDPGLIYDITPEDYLNYLCSLNYNSTQIALVSRGNFTCPSKRTFLQPGDLNYPSFSAFMKKKAKNFTVTFKRTVTNVGSPRSDYTVQINNPKGVTIIVKPEKLSFRRLGEKLSYQVSFVALGKREALSEFSFGSLVWLSGKYAVRSPIAVTWQ 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15321455 15329859 - Maker00028522 Lcy7g1234 638066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1234 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 774 IPR045051 -
Lcy7g1234 779 Gene3D Peptidase S8/S53 domain 150 640 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1234 779 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 153 164 IPR023827 -
Lcy7g1234 779 FunFam subtilisin-like protease SBT1.5 356 494 - -
Lcy7g1234 779 CDD PA_subtilisin_like 363 487 - -
Lcy7g1234 779 SUPERFAMILY Subtilisin-like 124 631 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1234 779 Pfam Subtilase family 148 619 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy7g1234 779 Pfam Fibronectin type-III domain 675 776 IPR041469 -
Lcy7g1234 779 ProSiteProfiles Serine proteases, subtilase domain profile. 132 627 - -
Lcy7g1234 779 CDD Peptidases_S8_3 122 591 IPR034197 -
Lcy7g1234 779 Pfam PA domain 385 472 IPR003137 -
Lcy7g1234 779 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lcy7g1234 779 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Lcy7g1234 779 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Lcy7g1234 779 FunFam Subtilisin-like protease SBT1.5 150 367 - -
Lcy7g1234 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Lcy7g1234 779 Pfam Peptidase inhibitor I9 42 125 IPR010259 -
Lcy7g1234 779 SUPERFAMILY PA domain 406 481 IPR046450 -
Lcy7g1234 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 125 IPR037045 -
Lcy7g1234 779 Gene3D - 356 494 - -
Lcy7g1234 779 Gene3D - 644 778 - -
Lcy7g1234 779 FunFam Subtilisin-like protease SBT1.5 644 779 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1729 Lcy-Chr12:38013485 Lcy7g1234 Lcy-Chr7:15321455 4.34E-221 dispersed
Lcy12g2078 Lcy-Chr12:42158737 Lcy7g1234 Lcy-Chr7:15321455 4.00E-221 dispersed
Lcy7g1234 Lcy-Chr7:15321455 Lcy8g1248 Lcy-Chr8:39042713 2.36E-229 dispersed
Lcy7g1232 Lcy-Chr7:15267859 Lcy7g1234 Lcy-Chr7:15321455 0 proximal
Lcy7g1234 Lcy-Chr7:15321455 Lcy7g1235 Lcy-Chr7:15369649 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1234 - - - 0.0