Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1235 ATGGCCTTTAGAGAAGTGTGGGTATTGTTGTGTATAGTGTTTGCTGCTTCAACTGCTGCTTTGGATCAGCAAACTTACATAATTCACATGGACACCACGAAGATGCCCACCACCAACCCTCAACAATGGTACACGGCCATGATTGATTCAGTCAATGAACTCGTATCTCTCGACGAGGACGACGAAGAAGAAGTATCAAATGCTGCCGAGATTCTTTACGTCTACAAAAATGTCATTTCAGGCAAGGTTTTATATATCGATGTTGACGAAAATATGAAATCTCAAGTTTATGAAGGCTTTGCTTCAAAGCTCTCAACCAAAAAGCTAAACTCTCTAAGCCAAACCCCGGGTTTCCTCACGGCCATTCCCGACCAACTACTACAACTCCACACCACACACTCCCCTCACTTCCTCGGCCTCAAAACAGGGCACGGCCTCTGGAACGCCACGAACTTGGCTTCCGATGTGGTCGTTGGTGTACTCGACACTGGCATTTGGCCCGAGCACGTAAGTTTTCAGGACAAGGGGCTGCCCCCAGTGCCAAGAAGATGGAAAGGGGGTTGTGAGGAGGGCCAGAAATTCTCACCTTCAAATTGTAATAGAAAACTCATTGGCGCAAGAGCCTTCATTAAGGCCTATGAGGCCAGTTTTGGTAGGTTGAATGAAAGTGGAGTGTTTCGGTCGCCTCGAGACTCGAGTGGACATGGCACTCACACGGCTTCCACTGCTGCTGGGAATCTCGTGTACAAAGCTGGCTTTTATAATCAAGCCTTGGGAAATGCTGCTGGATTGAGGTTCACTTCAAGAATTGCAGCGTACAAAGTATGCTGGCCACTAGGCTGCGCAATCGCCGACGTCCTAGCAGCGATGGACCGTGCTGTCGCCGACGGAGTCGACGTTCTGTCACTGTCTTTGGGTGGTAATCCAATTCCTTTTTACAATGACGGCCTAGCCATAGCTGCATTTGGTGCAACACAGAAAGGAGTTTTTGTGTCCTGTGCGGCGGGTAATTCTGGCCCAGCTCCCTCAACGGCTGGTAATTTAGCACCATGGATCATGACAGTGGGTGCGAGCTACACTGATAGAATCTTCCCAACCACTGTAAAGCTTGGAAATGGACAAGTTTTTGAAGGCTCTTCTTTGTATTCTGGGAACAACATAGGTCAACTACCACTTGTCTATAAACAAGGTCGACAAGGAGCAAACCTTTGCCTGGCTGGCTCACTTGTCCCATCAATGGTGACGGGTAAAATTGTGATATGTGAACGAGGAACAAACACAAGAATTGGGAAAGGAGAGCAAGTGAAATTAGCTGGAGGAGCTGGAATGATTCTGATCAACACACAACTCGAAGGGGAGGAGCTTTTTGCCGACCCTCATGTTTTACCAGCCACTTCTCTTGGAGCTGCAGCCGGCAAAGCCATAAAAAACTACATAGCTTCCTCAAAACAACCCAAAGCTTCAATCTCATTCTTTGGGACCAAATATGGAAGCCGAGCGCCAAGAGTAGCTGCATTTTCTTCTCGAGGGCCGAGCTCTATCGAACCCAATATTATCAAACCAGACATAATTGCACCAGGAGTCAATATCTTAGCTGCTTGGCCACCCATTGTGAGCCCAAGTGAGCTCGAGTTTGATAAAAGAAGAGTATTGTTCAATATCGTTTCAGGAACTTCTATGTCTTGCCCTCATGTTAGCGGCTTAGCCGCACTGCTTAAAGCAACACACAAGGATTGGTCACCTGCTGCCATCAAATCTGCTCTCATGACCACAGCTTACACTAATGACAACAAAATGAGTCCCATTTCTGACGTTGGCTCTACCAACGGCAAGCCTGCAAACCCTTTTGCTTTCGGTTCCGGCCATGTCGATCCCGAGAAAGCTTCCAATCCGGGGCTCGTCTATGATATCACGCCCGAAGACTACCTAAACTACTTGTGTAGCTTGAACTATAATTCAACACAAATTGCATTAGTTTCAAGAGGGAATTTCACTTGTCCATCAAAAAGAACATTTCATCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGTTACTGTTACATTGAAGAGAACAGTGACAAATGTTGGTAGCCCAAGGAGTGATTACACTGTTCAAATCAACAATCCAAAAGGAATAAAAATTAGTGTGAAGCCTGAGAAGCTAAGTTTTGGGAGATTGGGAGAGAAGTTAAGTTACAGAGTAAGTTTTGTTGCATTTGGAAAAAAAGAAGCTTTGAGTGAATTTTCTTTTGGATCTCTGGTTTGGCTCTCAGGAAAATATGTTGTAAGAAGTCCTATAGCAGTGACTTGGCAATAG 2346 45.87 MAFREVWVLLCIVFAASTAALDQQTYIIHMDTTKMPTTNPQQWYTAMIDSVNELVSLDEDDEEEVSNAAEILYVYKNVISGKVLYIDVDENMKSQVYEGFASKLSTKKLNSLSQTPGFLTAIPDQLLQLHTTHSPHFLGLKTGHGLWNATNLASDVVVGVLDTGIWPEHVSFQDKGLPPVPRRWKGGCEEGQKFSPSNCNRKLIGARAFIKAYEASFGRLNESGVFRSPRDSSGHGTHTASTAAGNLVYKAGFYNQALGNAAGLRFTSRIAAYKVCWPLGCAIADVLAAMDRAVADGVDVLSLSLGGNPIPFYNDGLAIAAFGATQKGVFVSCAAGNSGPAPSTAGNLAPWIMTVGASYTDRIFPTTVKLGNGQVFEGSSLYSGNNIGQLPLVYKQGRQGANLCLAGSLVPSMVTGKIVICERGTNTRIGKGEQVKLAGGAGMILINTQLEGEELFADPHVLPATSLGAAAGKAIKNYIASSKQPKASISFFGTKYGSRAPRVAAFSSRGPSSIEPNIIKPDIIAPGVNILAAWPPIVSPSELEFDKRRVLFNIVSGTSMSCPHVSGLAALLKATHKDWSPAAIKSALMTTAYTNDNKMSPISDVGSTNGKPANPFAFGSGHVDPEKASNPGLVYDITPEDYLNYLCSLNYNSTQIALVSRGNFTCPSKRTFHQPGDLNYPSFSVFMKKKAKNVTVTLKRTVTNVGSPRSDYTVQINNPKGIKISVKPEKLSFGRLGEKLSYRVSFVAFGKKEALSEFSFGSLVWLSGKYVVRSPIAVTWQ 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15369649 15377031 - Maker00028678 Lcy7g1235 638067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1235 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 90 IPR037045 -
Lcy7g1235 781 FunFam Subtilisin-like protease SBT1.5 155 371 - -
Lcy7g1235 781 CDD Peptidases_S8_3 127 593 IPR034197 -
Lcy7g1235 781 CDD PA_subtilisin_like 367 489 - -
Lcy7g1235 781 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Lcy7g1235 781 Pfam Peptidase inhibitor I9 25 130 IPR010259 -
Lcy7g1235 781 SUPERFAMILY Subtilisin-like 129 633 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1235 781 ProSiteProfiles Serine proteases, subtilase domain profile. 137 629 - -
Lcy7g1235 781 FunFam subtilisin-like protease SBT1.5 361 496 - -
Lcy7g1235 781 Pfam Subtilase family 154 621 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy7g1235 781 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Lcy7g1235 781 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Lcy7g1235 781 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Lcy7g1235 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Lcy7g1235 781 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Lcy7g1235 781 Gene3D Peptidase S8/S53 domain 155 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1235 781 Gene3D - 646 780 - -
Lcy7g1235 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 776 IPR045051 -
Lcy7g1235 781 Pfam PA domain 390 475 IPR003137 -
Lcy7g1235 781 Gene3D - 361 496 - -
Lcy7g1235 781 FunFam Subtilisin-like protease SBT1.5 646 781 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1232 Lcy-Chr7:15267859 Lcy7g1235 Lcy-Chr7:15369649 0 dispersed
Lcy7g1235 Lcy-Chr7:15369649 Lcy8g1248 Lcy-Chr8:39042713 6.07E-211 dispersed
Lcy7g1234 Lcy-Chr7:15321455 Lcy7g1235 Lcy-Chr7:15369649 0 tandem
Lcy7g1235 Lcy-Chr7:15369649 Lcy7g1236 Lcy-Chr7:15396160 2.30E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1235 - - - 0.0