Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy7g1236 | ATGTCGATATCGAAATCTTCTCCTCTTCTATTTTTCCTTCTTTTCTTCGTTGTAGGATACGTTGTTGCCGTTGAAATCAATGAGGGAAAGAAACATTTCATTGTTTTCATGGAGGATCAACCTGTTTTAAATGAGGTTAATGCAGTGGAAACACATCTCAATGTTCTAATGTCATTGAAGGAAAGCCAAGTCGAGGCAAAGGAGTCAATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCTGCCAAGCTTACTGAAGAGGAAGCCAAAACATTGTCAAAGAGGGAAGGTGTGTCTCATGTGATCCCAAACAGGTATAGAAAGCTACAAACAACAAGATCATGGGATTTCATTGGACTTCCTATTAATGCAAGAAGAAAAACCAAACAAGAGAGTGATATTATTGTGGGTTTATTTGATACTGGGATCACTCCAACAGCGGAAAGCTTTAAGGATGATGGGTTTGGTCCTCCACCCCGAAAATGGAAAGGCACATGTCTCCACTTTGCCAATTTCACTGGCTGCAACAACAAACTCATCGGAGCAAGATATTTCAAGCTCGACGGCAGCCCCGATCCCCTCGACATCTTGTCTCCGGTAGACATCAGTGGCCACGGCACGCACACGTCGTCAATCGCGACGGGCAATGCAGTTCCCGGAGCCAGCCTCTCCGGTCTGGCCGCAGGAACAGCCCGTGGCGGTGTGCCATCGGCGAGAGTGGCCATGTATAAGGTCTGCTGGTCGGGCACCGGGTGCTCCGATATGGATCTTCTGGCCGCCTTCGACGCCGCCATACAGGACGGTGTTGACGTCATTTCGATATCGATCGCCGGGAACGGCTTCGGCAACTACACCGAGGACGCAGTCGCCATCGGCGCGTTTCATGCCATGAAGAAGGCCATCATCACGGTGACCGCTGCGGGCAACACCGGTCCGACTGCCGGCAGCGTGGTGAACCACGCGCCGTGGATTTTGACGGTTGCTGCGAGTGGTATCGACCGGAAATTTGTGAGCCCGTTTGAGTTGGGCAATGGGAAGAACATCTCAGGAGTGGGAATAAACCTTTTCAATCCAAATCAAAAGATGTATCCGTTGGTGAGCGGAGGGGATGTGGCGATGAACCCACAGAGCAAAGACAGTGCAAGCTTTTGCGTTGATGGCACACTTGATCCAAGCAAGGTCAAAAGGAAGCTTGTATTCTGCAAATTGATCACTTGGGGCGCTGATTCTGTTGTCAAATCTATTGGTGCTTATGGCACTATCATTCAAAGTGATCAGTTTCTTCCCAATACTGATCTCTTCATGGCCCCTGCCTCCCTTGTTAGTAGCTTGGTTGGTGAGACCATTGACAACTACATCCACTCCACAAGAACACCAACGGCTGTGATATACAAATCAAGGCAACTGAAATCAGCAGCTCCAATCGTTGCTTTCTTCTCTTCCAGAGGTCCAAATCCAGGTTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTACACGCCACTTAAGTCACTGACGGGGCTGAAGGGTGACACTCAATTCTCCAAATTTACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCCGCCGCCGCCGCCTATGTCAAGTCCTTCCACCCTCTTTGGTCTCCTGCTGCCATTAGATCCGCTCTCTTGACCACTGCGAGCCCGATCAGCCGACGACTGAACCCCGACGGAGAATTTTCATATGGTGCTGGCAACTTAAGTCCATCAAGAGCCAGAAACCCTGGCCTAATCTACGACCTCAACGAAATGTCATACATCCAATTCCTTTGCAGCGAAGGCTACACCGGATCTTCAATTTCCATCCTCACCGGGACCAAATCCATAGACTGCTCCACTCTCCGTGCCCAAGGATACGACTCTCTCAATTACCCTACCTTTCAACTCAGCCTCAAAACCACCCGACAGCCGACGACCGCCGTGTTCTGGCGGCAAGTCACGAACGTTGGCCGCCCCGTCTCCGTCTACAACGCCACCGTGAGGGCTCCCCCCGGGGTGGAGATCACGGTGGTGCCAGCAACCCTGTCGCTCTCACAGTTGCTGCAGAAGCAAAACTTCAAGGTCATTGTGAAGGCCAGTCCTTTGCCGTCCGCCAAAATGGTGTCGGGCTCGCTTACTTGGGCTGGTGCTCGATATGTTGTGAGAAGTCCCATTGTCATTTATGGCTCGTGA | 2229 | 51.05 | MSISKSSPLLFFLLFFVVGYVVAVEINEGKKHFIVFMEDQPVLNEVNAVETHLNVLMSLKESQVEAKESMVYSYTKSFNAFAAKLTEEEAKTLSKREGVSHVIPNRYRKLQTTRSWDFIGLPINARRKTKQESDIIVGLFDTGITPTAESFKDDGFGPPPRKWKGTCLHFANFTGCNNKLIGARYFKLDGSPDPLDILSPVDISGHGTHTSSIATGNAVPGASLSGLAAGTARGGVPSARVAMYKVCWSGTGCSDMDLLAAFDAAIQDGVDVISISIAGNGFGNYTEDAVAIGAFHAMKKAIITVTAAGNTGPTAGSVVNHAPWILTVAASGIDRKFVSPFELGNGKNISGVGINLFNPNQKMYPLVSGGDVAMNPQSKDSASFCVDGTLDPSKVKRKLVFCKLITWGADSVVKSIGAYGTIIQSDQFLPNTDLFMAPASLVSSLVGETIDNYIHSTRTPTAVIYKSRQLKSAAPIVAFFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTASPISRRLNPDGEFSYGAGNLSPSRARNPGLIYDLNEMSYIQFLCSEGYTGSSISILTGTKSIDCSTLRAQGYDSLNYPTFQLSLKTTRQPTTAVFWRQVTNVGRPVSVYNATVRAPPGVEITVVPATLSLSQLLQKQNFKVIVKASPLPSAKMVSGSLTWAGARYVVRSPIVIYGS | 742 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15396160 | 15406398 | - | Maker00028592 | Lcy7g1236 | 638068 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy7g1236 | 742 | Pfam | Peptidase inhibitor I9 | 33 | 111 | IPR010259 | - | |
Lcy7g1236 | 742 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 56 | 738 | IPR045051 | - | |
Lcy7g1236 | 742 | Gene3D | - | 334 | 470 | - | - | |
Lcy7g1236 | 742 | Pfam | Fibronectin type-III domain | 641 | 739 | IPR041469 | - | |
Lcy7g1236 | 742 | CDD | PA_subtilisin_like | 343 | 464 | - | - | |
Lcy7g1236 | 742 | Pfam | Subtilase family | 133 | 582 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy7g1236 | 742 | Gene3D | Peptidase S8/S53 domain | 134 | 605 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy7g1236 | 742 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 115 | 592 | - | - | |
Lcy7g1236 | 742 | FunFam | Subtilisin-like protease SBT1.5 | 134 | 343 | - | - | |
Lcy7g1236 | 742 | Gene3D | - | 609 | 741 | - | - | |
Lcy7g1236 | 742 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 531 | 541 | IPR023828 | - | |
Lcy7g1236 | 742 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 111 | IPR037045 | - | |
Lcy7g1236 | 742 | SUPERFAMILY | Subtilisin-like | 110 | 596 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy7g1236 | 742 | PRINTS | Subtilisin serine protease family (S8) signature | 202 | 215 | IPR015500 | - | |
Lcy7g1236 | 742 | PRINTS | Subtilisin serine protease family (S8) signature | 132 | 151 | IPR015500 | - | |
Lcy7g1236 | 742 | PRINTS | Subtilisin serine protease family (S8) signature | 530 | 546 | IPR015500 | - | |
Lcy7g1236 | 742 | CDD | Peptidases_S8_3 | 109 | 567 | IPR034197 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy7g1236 | Lcy-Chr7:15396160 | Lcy9g0404 | Lcy-Chr9:11378610 | 3.24E-202 | dispersed | |
Lcy9g0817 | Lcy-Chr9:27249530 | Lcy7g1236 | Lcy-Chr7:15396160 | 4.31E-06 | dispersed | |
Lcy7g1235 | Lcy-Chr7:15369649 | Lcy7g1236 | Lcy-Chr7:15396160 | 2.30E-125 | tandem | |
Lcy7g1236 | Lcy-Chr7:15396160 | Lcy7g1237 | Lcy-Chr7:15436047 | 0 | tandem |
Pathway information
