Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1236 ATGTCGATATCGAAATCTTCTCCTCTTCTATTTTTCCTTCTTTTCTTCGTTGTAGGATACGTTGTTGCCGTTGAAATCAATGAGGGAAAGAAACATTTCATTGTTTTCATGGAGGATCAACCTGTTTTAAATGAGGTTAATGCAGTGGAAACACATCTCAATGTTCTAATGTCATTGAAGGAAAGCCAAGTCGAGGCAAAGGAGTCAATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCTGCCAAGCTTACTGAAGAGGAAGCCAAAACATTGTCAAAGAGGGAAGGTGTGTCTCATGTGATCCCAAACAGGTATAGAAAGCTACAAACAACAAGATCATGGGATTTCATTGGACTTCCTATTAATGCAAGAAGAAAAACCAAACAAGAGAGTGATATTATTGTGGGTTTATTTGATACTGGGATCACTCCAACAGCGGAAAGCTTTAAGGATGATGGGTTTGGTCCTCCACCCCGAAAATGGAAAGGCACATGTCTCCACTTTGCCAATTTCACTGGCTGCAACAACAAACTCATCGGAGCAAGATATTTCAAGCTCGACGGCAGCCCCGATCCCCTCGACATCTTGTCTCCGGTAGACATCAGTGGCCACGGCACGCACACGTCGTCAATCGCGACGGGCAATGCAGTTCCCGGAGCCAGCCTCTCCGGTCTGGCCGCAGGAACAGCCCGTGGCGGTGTGCCATCGGCGAGAGTGGCCATGTATAAGGTCTGCTGGTCGGGCACCGGGTGCTCCGATATGGATCTTCTGGCCGCCTTCGACGCCGCCATACAGGACGGTGTTGACGTCATTTCGATATCGATCGCCGGGAACGGCTTCGGCAACTACACCGAGGACGCAGTCGCCATCGGCGCGTTTCATGCCATGAAGAAGGCCATCATCACGGTGACCGCTGCGGGCAACACCGGTCCGACTGCCGGCAGCGTGGTGAACCACGCGCCGTGGATTTTGACGGTTGCTGCGAGTGGTATCGACCGGAAATTTGTGAGCCCGTTTGAGTTGGGCAATGGGAAGAACATCTCAGGAGTGGGAATAAACCTTTTCAATCCAAATCAAAAGATGTATCCGTTGGTGAGCGGAGGGGATGTGGCGATGAACCCACAGAGCAAAGACAGTGCAAGCTTTTGCGTTGATGGCACACTTGATCCAAGCAAGGTCAAAAGGAAGCTTGTATTCTGCAAATTGATCACTTGGGGCGCTGATTCTGTTGTCAAATCTATTGGTGCTTATGGCACTATCATTCAAAGTGATCAGTTTCTTCCCAATACTGATCTCTTCATGGCCCCTGCCTCCCTTGTTAGTAGCTTGGTTGGTGAGACCATTGACAACTACATCCACTCCACAAGAACACCAACGGCTGTGATATACAAATCAAGGCAACTGAAATCAGCAGCTCCAATCGTTGCTTTCTTCTCTTCCAGAGGTCCAAATCCAGGTTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTACACGCCACTTAAGTCACTGACGGGGCTGAAGGGTGACACTCAATTCTCCAAATTTACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCCGCCGCCGCCGCCTATGTCAAGTCCTTCCACCCTCTTTGGTCTCCTGCTGCCATTAGATCCGCTCTCTTGACCACTGCGAGCCCGATCAGCCGACGACTGAACCCCGACGGAGAATTTTCATATGGTGCTGGCAACTTAAGTCCATCAAGAGCCAGAAACCCTGGCCTAATCTACGACCTCAACGAAATGTCATACATCCAATTCCTTTGCAGCGAAGGCTACACCGGATCTTCAATTTCCATCCTCACCGGGACCAAATCCATAGACTGCTCCACTCTCCGTGCCCAAGGATACGACTCTCTCAATTACCCTACCTTTCAACTCAGCCTCAAAACCACCCGACAGCCGACGACCGCCGTGTTCTGGCGGCAAGTCACGAACGTTGGCCGCCCCGTCTCCGTCTACAACGCCACCGTGAGGGCTCCCCCCGGGGTGGAGATCACGGTGGTGCCAGCAACCCTGTCGCTCTCACAGTTGCTGCAGAAGCAAAACTTCAAGGTCATTGTGAAGGCCAGTCCTTTGCCGTCCGCCAAAATGGTGTCGGGCTCGCTTACTTGGGCTGGTGCTCGATATGTTGTGAGAAGTCCCATTGTCATTTATGGCTCGTGA 2229 51.05 MSISKSSPLLFFLLFFVVGYVVAVEINEGKKHFIVFMEDQPVLNEVNAVETHLNVLMSLKESQVEAKESMVYSYTKSFNAFAAKLTEEEAKTLSKREGVSHVIPNRYRKLQTTRSWDFIGLPINARRKTKQESDIIVGLFDTGITPTAESFKDDGFGPPPRKWKGTCLHFANFTGCNNKLIGARYFKLDGSPDPLDILSPVDISGHGTHTSSIATGNAVPGASLSGLAAGTARGGVPSARVAMYKVCWSGTGCSDMDLLAAFDAAIQDGVDVISISIAGNGFGNYTEDAVAIGAFHAMKKAIITVTAAGNTGPTAGSVVNHAPWILTVAASGIDRKFVSPFELGNGKNISGVGINLFNPNQKMYPLVSGGDVAMNPQSKDSASFCVDGTLDPSKVKRKLVFCKLITWGADSVVKSIGAYGTIIQSDQFLPNTDLFMAPASLVSSLVGETIDNYIHSTRTPTAVIYKSRQLKSAAPIVAFFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTASPISRRLNPDGEFSYGAGNLSPSRARNPGLIYDLNEMSYIQFLCSEGYTGSSISILTGTKSIDCSTLRAQGYDSLNYPTFQLSLKTTRQPTTAVFWRQVTNVGRPVSVYNATVRAPPGVEITVVPATLSLSQLLQKQNFKVIVKASPLPSAKMVSGSLTWAGARYVVRSPIVIYGS 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15396160 15406398 - Maker00028592 Lcy7g1236 638068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1236 742 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Lcy7g1236 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 738 IPR045051 -
Lcy7g1236 742 Gene3D - 334 470 - -
Lcy7g1236 742 Pfam Fibronectin type-III domain 641 739 IPR041469 -
Lcy7g1236 742 CDD PA_subtilisin_like 343 464 - -
Lcy7g1236 742 Pfam Subtilase family 133 582 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy7g1236 742 Gene3D Peptidase S8/S53 domain 134 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1236 742 ProSiteProfiles Serine proteases, subtilase domain profile. 115 592 - -
Lcy7g1236 742 FunFam Subtilisin-like protease SBT1.5 134 343 - -
Lcy7g1236 742 Gene3D - 609 741 - -
Lcy7g1236 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Lcy7g1236 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Lcy7g1236 742 SUPERFAMILY Subtilisin-like 110 596 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1236 742 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Lcy7g1236 742 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Lcy7g1236 742 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Lcy7g1236 742 CDD Peptidases_S8_3 109 567 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1236 Lcy-Chr7:15396160 Lcy9g0404 Lcy-Chr9:11378610 3.24E-202 dispersed
Lcy9g0817 Lcy-Chr9:27249530 Lcy7g1236 Lcy-Chr7:15396160 4.31E-06 dispersed
Lcy7g1235 Lcy-Chr7:15369649 Lcy7g1236 Lcy-Chr7:15396160 2.30E-125 tandem
Lcy7g1236 Lcy-Chr7:15396160 Lcy7g1237 Lcy-Chr7:15436047 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1236 - - - 0.0