Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1237 ATGTCGATATTGAAATCTTCTCGTCTTCTCGTCTTTGTTCTTTTCTTCGTCGTAGCATTCATCGCTGCCGTAGAATTCGATGAGGAAAAGAAACATTTCATAGTTTTCCTGGAGAATAAACCTGTTTTAAATGAAGTTGATGCAGTAGAAACACATCTTAATGTTCTCATGTCAGTGAAGGAAAGTCATGTCGAGGCAAAGGAGTCAATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCTGCCAAGCTGACTGAGGAGGAAGCCAAAACATTGTCAAAGAGGGAAGATGTGCACCATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCATGGGACTTCATTGGACTTCCTATTAATGCAAGAAGAAATACCAAACAGGAGAGTGATATTGTTGTGGGTTTATTTGATACTGGGATCACCCCAACGGCTGAGAGCTTTAAAGATGATGGATTTGGTCCTCCACCCAAAAAATGGAAAGGCAGCTGTCACCACTTTGCCAATTTCACTGGCTGCAACAACAAGCTCATCGGAGCAAGATATTTCAAGCTCGACGGCAGCTCCGATCCCACCGACATCTTGTCGCCGATAGACGTCGATGGCCACGGCACGCACACGTCCTCAACGGCAACAGGCAATGCAATTGCCGGAGCCAGCCTCTCCGGTCTGGCCAAAGGAACCGCCCGTGGCGGCGTGCCATCGGCGAGAGTTGCCATGTACAAGGTCTGCTGGGAAAGCACGGGGTGCGCCGATATGGATATTCTGGCCGCCTTCGACGCTGCCATACATGACGGGGTCGATGTCATTTCGATATCGATCGGCGGAGGCAGCTTTGGCAATTACTCCGACGACTCGATTTCCATCGGCGCATTTCATGCCATGAAGAAGGGCATCATCACCGTGACCTCCGCCGGCAACAGCGGTCCCGTTGCCGGCAGCATCGTCAACCACGCGCCGTGGATTGTGACGGTTGCTGCCAGTGCTATTGATCGGAAATTTATCAGCCCATTGGAGTTGGGCAATGGGAAGAACATCTCAGGAGTAGCGATAAACACGTTCAATCCAAAGGTAAAAATGTACCCATTGGTGAGCGGACGGGACGTGGCGAGGAACTCAGAGAGCAAAGAGAGTGCGAGCTACTGTGCTGAGGAGTCACTTGATCGAAACAAGGTGAAAGGAAACCTTGTGTTGTGCAAATTCCTGACTTGGGGCACTGATTCTGTTGTGAAATCACTTGGTGGTAGTGGCGTTATCATTCAAAGTGATCAGTTTCTTGACAATGCCGATATCTTCATGGCCCCTGCCACTGTCGTTAGTAGCTTGGTTGGTGATACCATTGCCAACTACATCAAATCCACAAAAACTCCAAAGGCAGTGATATACAGAACAAGACAATTCAAAGCAACAGCTCCAATCGTGGCTTCCTTCTCATCCAGAGGCCCAAATCCAGGCTCCAACCGTATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTATACGCCGCTGAAGTCACTGACGGGGCTGAAGGGAGACACTCAATTCTCCAAATTTACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCCGCCGCGGCCGCTTATGTCAAGTCTTTCCACCCCCACTGGTCTCCAGCTGCCGTTAGATCCGCCTTGATCACCACCGCGAGACCAATCAGCCGACGGTTGAATCCCGATGGCGAATTCGCATATGGCGCTGGCAACCTAAATCCATCCCAAGCCAAAAATCCTGGCCTAATCTACGACCTCAACGAAATGTCTTACATCCAATTCCTTTGTCGCGAAGGCTACACGGACTCTTCAATCGCTATCCTCGCCGGAACCAAATCTATAAACTGCTCTACTCTAATCCCTGGTCTAGGCCACGACTCTCTCAATTACCCAACGATTCAACTCAACCTAAAAAACACCCAACGTCCAATGACCACCGTGTTTCGGCGTCGAGTCACCAACGTCGGTCGTGCCGTCTCTGTCTATAATGCCACCATCCGAGCTCCCCCTGGGGTGGAGATCACGGTGGTACCGACGACTCTGTCGTTCTCACGGTTGTTGCAAAAGCGAAGCTTTAAGATCGTTGTGAAGGCCAGTCCTTTGCCATCGACAAAAATGGTGTCGGGTTCGCTTGCTTGGGTTGGGGCTCGGCATGTTGTGAGAAGTCCTATTGTTGTTTATAGCCCCTGA 2232 50.04 MSILKSSRLLVFVLFFVVAFIAAVEFDEEKKHFIVFLENKPVLNEVDAVETHLNVLMSVKESHVEAKESMVYSYTKSFNAFAAKLTEEEAKTLSKREDVHHVIPNKYRKLQTTRSWDFIGLPINARRNTKQESDIVVGLFDTGITPTAESFKDDGFGPPPKKWKGSCHHFANFTGCNNKLIGARYFKLDGSSDPTDILSPIDVDGHGTHTSSTATGNAIAGASLSGLAKGTARGGVPSARVAMYKVCWESTGCADMDILAAFDAAIHDGVDVISISIGGGSFGNYSDDSISIGAFHAMKKGIITVTSAGNSGPVAGSIVNHAPWIVTVAASAIDRKFISPLELGNGKNISGVAINTFNPKVKMYPLVSGRDVARNSESKESASYCAEESLDRNKVKGNLVLCKFLTWGTDSVVKSLGGSGVIIQSDQFLDNADIFMAPATVVSSLVGDTIANYIKSTKTPKAVIYRTRQFKATAPIVASFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPHWSPAAVRSALITTARPISRRLNPDGEFAYGAGNLNPSQAKNPGLIYDLNEMSYIQFLCREGYTDSSIAILAGTKSINCSTLIPGLGHDSLNYPTIQLNLKNTQRPMTTVFRRRVTNVGRAVSVYNATIRAPPGVEITVVPTTLSFSRLLQKRSFKIVVKASPLPSTKMVSGSLAWVGARHVVRSPIVVYSP 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15436047 15446550 - Maker00028673 Lcy7g1237 638069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1237 743 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Lcy7g1237 743 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Lcy7g1237 743 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Lcy7g1237 743 Gene3D - 609 742 - -
Lcy7g1237 743 CDD PA_subtilisin_like 341 464 - -
Lcy7g1237 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 739 IPR045051 -
Lcy7g1237 743 CDD Peptidases_S8_3 109 566 IPR034197 -
Lcy7g1237 743 Gene3D - 334 470 - -
Lcy7g1237 743 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Lcy7g1237 743 FunFam Subtilisin-like protease SBT1.5 134 343 - -
Lcy7g1237 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Lcy7g1237 743 SUPERFAMILY Protease propeptides/inhibitors 31 109 - -
Lcy7g1237 743 Gene3D Peptidase S8/S53 domain 134 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1237 743 ProSiteProfiles Serine proteases, subtilase domain profile. 115 592 - -
Lcy7g1237 743 Pfam Subtilase family 133 582 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy7g1237 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Lcy7g1237 743 SUPERFAMILY Subtilisin-like 110 596 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy7g1237 743 Pfam Fibronectin type-III domain 642 740 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1264 Lcy-Chr1:11957413 Lcy7g1237 Lcy-Chr7:15436047 1.81E-222 dispersed
Lcy7g1237 Lcy-Chr7:15436047 Lcy9g0404 Lcy-Chr9:11378610 3.71E-204 dispersed
Lcy7g1236 Lcy-Chr7:15396160 Lcy7g1237 Lcy-Chr7:15436047 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1237 - - - 0.0