Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1283 ATGAGCGTCTCCAGTCGGTGGTTTCCCGAGGGCGTCGCCATTGGAGGGCATCTTGTTCTCAACTCCATGTCTACAGAAGGTGAGACTGTTCGCAATGCCAATCCGAGTGAGCTCCAAGAGCGAGTAGATGAAAGGAAGGGGAATATTGCTTGCTTTGAAGAATTTTTATCCATTTTTGCATCTCTCATTAACTTCATTAGATTCTGTGCTCTTTTTGGTGATGCGAGAGGATCTACTTCGCATTTGAGATCTGATTTCAAGGTGTTCTCTGCGATGAGACTTATGGTTTTGAGGTACTCTTCATTCTTCTTTGTCTTGTTGGTTTGTGTACTGCCTCTGGTTCGAGCTGGAGATGCAGAAGCTCTGTTAGCACTGAAAGAATCTCTCGACCCTGGGAACTCGCTGCTATGGCGAGGAAGCTCTGTCTGCAACTGGCAAGGGGTGAAAGAGTGCACAAATGGGCGGGTAACTAAGCTCGTTCTGGAGCATTTAAATCTCTCTGGTGTTCTTAACCACAAGATTTTGAATCGTTTAGATCAACTTCGTGTTCTTAGTTTCAAAGGAAATTCAATTTCCGGCCAAATCCCTGACCTCTCGGGTCTCGTCAATCTCAAATCCCTCTATCTAAGCGACAACAACTTTTCCGGCGAATTTCCGAGCTCCATCTCCGATCTACACCGCTTGAAGGTCGTCGTTCTTTCAGGTAACCAAATATCTGGCCCCATTCCAGACTCGCTGCTGAAACTCCGGCGTCTCTATGTTCTACACCTTCAGGACAACCAATTCACCGGTTCCATCCCTCCTTTCAACCAAACCAGTCTTCGATTCTTCAATGTCTCTAACAACCGCCTCTCCGGCGACATCCCAGTAACCCCCGCCTTGGTCCGCTTCAACGTGTCGTCATTTTCCGGCAACCTGGAACTTTGCGGAGAACAAATTCAGAACCCCTGTGGAAATGTTGCCATTGCGCCATCATCGAGTCCCTCTTATCCACAAATCCCAAGCTCAAGCTCGTCTTCAAGACGCAACAAATTGATCAAGATAATAGCAGGAAGCGTTGGTGGGTTTATCGGACTTCTATTAATCATTCTTCTACTGTGCATGATTTGCAAGTGTAGGGAAAGAAAGAGCCTAGCGGAGGTTAGAAACAAAGGAATCGGCGACGAAGGGATGGGGATAGAGGAAGCAGCTGGAACTGCCGGCGGTGGCAGAGGAGGTAATAACGGAGGAAAGCAAGGGGGATTTTCATGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACGTATAGCTTGGAAGATCTGTTGAAAGCTTCGGCGGAGACATTGGGCCGAGGGACCATCGGAAGCACATACAAGGCGGTTATGGAATCTGGGTATATTGTGACGGTGAAGCGGCTGAAGGATGCAAGGTACCCTCGAGCAGAGGAGTTCGGACGGCAGATGGAGGTTCTTGGGCGGCTCAGACACCCCAACTTGGTCCCTCTCAGGGCCTATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTATTTTCCCAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGATTTGGCCAATGGTCTGCTGTATATCCACCAGAACCCTGGCTTAACCCATGGAAACTTGAAATCCTCAAACGTACTATTAGGATCTGATTTCGAGTCGTGTCTTACTGATTATGGTCTTAACTTATTCCGAGATCCCGATTCACTCGAAGAACCTAGTGCAACTTCACTCTTTTACCGAGCTCCCGAATGCCGCGACATTCGTAAACCTACCACACAACAAGCCGACATCTATAGCTTTGGTGTTCTTCTATTGGAGCTTCTAACTGGAAAAACACCATTTCAAGATCTAGTCCAAGAACATGGTTCTGACATTCCCAAGTGGGTTAGTTCAGTTAGAGAAGAGGAGACGGAGTCCGGAGATGATCCCGCTTCTGGGAACGAGGCATCGGAGGAGAAACTTCAAGCTCTTTTGAACATTGCAATGGCTTGTGTTTCGCTTATGCCACAGAACCGACCAACGATGAGGGAAGTTCTAAAGATGATTAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGCAGTGACCATTCACCAGGGAGATGGTCAGATATTGTCCAGAGTTTGCCCAGAGAAGAACACTCAAGCATTTGA 2250 47.82 MSVSSRWFPEGVAIGGHLVLNSMSTEGETVRNANPSELQERVDERKGNIACFEEFLSIFASLINFIRFCALFGDARGSTSHLRSDFKVFSAMRLMVLRYSSFFFVLLVCVLPLVRAGDAEALLALKESLDPGNSLLWRGSSVCNWQGVKECTNGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSISGQIPDLSGLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVLSGNQISGPIPDSLLKLRRLYVLHLQDNQFTGSIPPFNQTSLRFFNVSNNRLSGDIPVTPALVRFNVSSFSGNLELCGEQIQNPCGNVAIAPSSSPSYPQIPSSSSSSRRNKLIKIIAGSVGGFIGLLLIILLLCMICKCRERKSLAEVRNKGIGDEGMGIEEAAGTAGGGRGGNNGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADIYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLMPQNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHSSI 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16925236 16930421 - Maker00028615 Lcy7g1283 638115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1283 749 MobiDBLite consensus disorder prediction 659 680 - -
Lcy7g1283 749 Gene3D Phosphorylase Kinase; domain 1 427 519 - -
Lcy7g1283 749 SUPERFAMILY Protein kinase-like (PK-like) 448 723 IPR011009 -
Lcy7g1283 749 ProSiteProfiles Protein kinase domain profile. 444 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g1283 749 Gene3D Ribonuclease Inhibitor 116 269 IPR032675 -
Lcy7g1283 749 Gene3D Ribonuclease Inhibitor 270 320 IPR032675 -
Lcy7g1283 749 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515(InterPro)
Lcy7g1283 749 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 113 721 IPR046959 -
Lcy7g1283 749 MobiDBLite consensus disorder prediction 720 734 - -
Lcy7g1283 749 SUPERFAMILY L domain-like 124 309 - -
Lcy7g1283 749 MobiDBLite consensus disorder prediction 720 749 - -
Lcy7g1283 749 Pfam Leucine rich repeat N-terminal domain 117 148 IPR013210 -
Lcy7g1283 749 Gene3D Transferase(Phosphotransferase) domain 1 520 735 - -
Lcy7g1283 749 FunFam Nuclear pore complex protein NUP107 115 268 - -
Lcy7g1283 749 Pfam Protein kinase domain 447 711 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0973 Lcy-Chr1:8538409 Lcy7g1283 Lcy-Chr7:16925236 1.40E-114 dispersed
Lcy7g1283 Lcy-Chr7:16925236 Lcy8g1684 Lcy-Chr8:43400948 7.12E-69 dispersed
Lcy12g0196 Lcy-Chr12:2415569 Lcy7g1283 Lcy-Chr7:16925236 3.29E-70 wgd
Lcy13g1146 Lcy-Chr13:26469880 Lcy7g1283 Lcy-Chr7:16925236 8.65E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66087 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1283 - - - 0.0